Note: Insertion ids mentioned in this report are for internal use (not linked to any database) and will change if the pipeline is re-run.
Note: A “unique” insertion is the merged result after the allele-aware merging from both callers for each patient, and then merged across patients. If we were working with SNPs, a “unique” SNP would be, rs123, for example, defined by its position and alternative(s) allele(s). A unique insertion is defined by its position, length, and inserted sequence.
The analysis has identified:
The stringent criterion (both callers) has left:
192 unique insertions that passed the stringent filtering. (7.4% of the total unique insertions), had at least one occurrence genotyped as 0/0.
These amount to 217 total count (4.6% of filter-passing occurrences).
114 of these unique insertions were genotyped as 0/0 for all their occurrences, amounting to 139 insertion counts.
Of these fully wrong calls, 89 were only found on a single patient each (78.1% of the 114).
The strict criteria missed calls for 148 unique insertions (5.7%).
These mean a total of 148 occurrences, out of 4 712 calls that passed the stringent filter.
148 unique insertions had more false negative occurrences than positive ones.
The discrepancies between genotyping and the lax filtering is also summarized in the table below.
Criterion | Unique INS with false positives (%) | Total false positives (%) | Unique INS (total) with all false positives | Unique INS with false negatives (%) | Total false negatives (Total positives) | Unique INS with more false negatives than positives |
|---|---|---|---|---|---|---|
Strict | 192 | 217 | 114 | 148 | 148 | 148 |
Lax | 508 | 569 | 374 | 0 | 0 | 0 |
The next sections only take into account insertions that passed the strict criterion on at least one sample, and that were not genotyped as 0/0 on all samples.
791 TE insertions were found on all cases in homozygosis.
Position | Length | Type | AF |
|---|---|---|---|
chr1:1 477 853 | 132 | SINE (AluSp) | 1 |
chr1:1 993 704 | 146 | SINE (FLAM_C) | 1 |
chr1:8 386 567 | 310 | SINE (AluYa5) | 1 |
chr1:9 968 550 | 140 | SINE (AluSx) | 1 |
chr1:13 658 441 | 125 | Retroposon (SVA_B) | 1 |
chr1:16 424 204 | 134 | SINE (AluYk2) | 1 |
chr1:17 868 631 | 66 | DNA (MADE1) | 1 |
chr1:21 166 095 | 316 | SINE (AluYa5) | 1 |
chr1:26 818 635 | 96 | Retroposon (SVA_F) | 1 |
chr1:29 100 312 | 324 | SINE (AluYg6) | 1 |
chr1:37 967 098 | 315 | SINE (AluY) | 1 |
chr1:38 485 066 | 75 | SINE (FRAM) | 1 |
chr1:41 053 118 | 32 | SINE (AluSp) | 1 |
chr1:46 213 358 | 333 | SINE (AluYb8) | 1 |
chr1:51 711 458 | 354 | Retroposon (SVA_A) | 1 |
chr1:52 869 962 | 97 | Retroposon (SVA_F) | 1 |
chr1:59 406 189 | 318 | SINE (AluYa5) | 1 |
chr1:63 473 989 | 117 | Retroposon (SVA_F) | 1 |
chr1:64 492 377 | 346 | SINE (AluY) | 1 |
chr1:69 465 247 | 36 | LINE (L1P3) | 1 |
chr1:74 989 508 | 40 | LINE (L1P1) | 1 |
chr1:79 116 389 | 306 | SINE (AluYb9) | 1 |
chr1:79 883 734 | 43 | LTR (THE1D-int) | 1 |
chr1:86 216 561 | 193 | Retroposon (SVA_F) | 1 |
chr1:90 891 789 | 47 | Retroposon (SVA_F) | 1 |
chr1:92 701 961 | 323 | SINE (AluYa5) | 1 |
chr1:93 032 654 | 332 | SINE (AluYa5) | 1 |
chr1:99 823 666 | 39 | Retroposon (SVA_C) | 1 |
chr1:100 528 653 | 326 | SINE (AluYb9) | 1 |
chr1:100 819 212 | 512 | LINE (L1M5) | 1 |
chr1:102 047 084 | 66 | LTR (MER50-int) | 1 |
chr1:103 272 218 | 96 | LTR (HERVL-int) | 1 |
chr1:105 788 296 | 189 | SINE (AluYk2) | 1 |
chr1:108 675 979 | 159 | Retroposon (SVA_A) | 1 |
chr1:111 581 052 | 319 | SINE (AluYa5) | 1 |
chr1:112 449 371 | 315 | SINE (AluYa5) | 1 |
chr1:117 430 024 | 175 | Retroposon (SVA_F) | 1 |
chr1:118 538 067 | 320 | SINE (AluYa5) | 1 |
chr1:125 013 224 | 221 | LINE (L1PA3) | 1 |
chr1:147 186 625 | 315 | SINE (AluYa5) | 1 |
chr1:147 191 656 | 173 | LINE (L1P1) | 1 |
chr1:147 949 446 | 118 | Retroposon (SVA_F) | 1 |
chr1:150 227 792 | 291 | SINE (AluYb8) | 1 |
chr1:151 769 284 | 91 | Retroposon (SVA_B) | 1 |
chr1:155 700 905 | 348 | Retroposon (SVA_E) | 1 |
chr1:155 954 591 | 319 | SINE (AluYb8) | 1 |
chr1:159 449 984 | 90 | Retroposon (SVA_F) | 1 |
chr1:162 791 517 | 316 | SINE (AluYa5) | 1 |
chr1:162 868 630 | 111 | LINE (L1PBa1) | 1 |
chr1:165 690 066 | 272 | SINE (AluYa5) | 1 |
chr1:169 993 600 | 163 | SINE (AluSz) | 1 |
chr1:176 396 708 | 125 | Retroposon (SVA_F) | 1 |
chr1:187 615 773 | 36 | Retroposon (SVA_F) | 1 |
chr1:188 469 075 | 303 | SINE (AluY) | 1 |
chr1:189 277 895 | 314 | SINE (AluYa8) | 1 |
chr1:190 033 721 | 116 | LTR (MER67C) | 1 |
chr1:191 119 508 | 134 | SINE (AluSx) | 1 |
chr1:196 184 400 | 332 | SINE (AluY) | 1 |
chr1:203 919 175 | 225 | Retroposon (SVA_A) | 1 |
chr1:210 745 033 | 121 | SINE (AluSz6) | 1 |
chr1:214 869 422 | 50 | Retroposon (SVA_F) | 1 |
chr1:220 466 559 | 97 | Retroposon (SVA_F) | 1 |
chr1:230 949 403 | 303 | SINE (AluYb8) | 1 |
chr1:234 669 965 | 321 | SINE (AluYa5) | 1 |
chr1:237 804 310 | 307 | SINE (AluYa5) | 1 |
chr1:248 911 726 | 126 | Retroposon (SVA_F) | 1 |
chr2:1 316 559 | 36 | DNA (Tigger4b) | 1 |
chr2:2 536 161 | 315 | SINE (AluYe5) | 1 |
chr2:5 422 761 | 326 | SINE (AluYb8) | 1 |
chr2:6 377 285 | 319 | SINE (AluYa5) | 1 |
chr2:9 748 659 | 325 | SINE (AluYb8) | 1 |
chr2:11 213 564 | 311 | SINE (AluYa5) | 1 |
chr2:11 286 232 | 325 | SINE (AluYa5) | 1 |
chr2:15 379 414 | 312 | SINE (AluY) | 1 |
chr2:15 541 820 | 154 | Retroposon (SVA_E) | 1 |
chr2:21 573 937 | 296 | SINE (AluYd8) | 1 |
chr2:31 336 819 | 317 | SINE (AluYa5) | 1 |
chr2:31 727 126 | 318 | SINE (AluYa5) | 1 |
chr2:36 777 087 | 306 | SINE (AluY) | 1 |
chr2:39 079 153 | 61 | LINE (L1M5) | 1 |
chr2:39 088 182 | 315 | SINE (AluYa5) | 1 |
chr2:43 183 576 | 63 | SINE (AluSq2) | 1 |
chr2:44 588 251 | 124 | Retroposon (SVA_F) | 1 |
chr2:44 588 252 | 84 | Retroposon (SVA_F) | 1 |
chr2:44 588 991 | 260 | Retroposon (SVA_F) | 1 |
chr2:44 598 695 | 316 | SINE (AluYa5) | 1 |
chr2:46 701 810 | 291 | SINE (AluYa5) | 1 |
chr2:47 092 140 | 330 | SINE (AluY) | 1 |
chr2:48 555 326 | 48 | Retroposon (SVA_F) | 1 |
chr2:48 555 845 | 77 | Retroposon (SVA_F) | 1 |
chr2:50 375 489 | 327 | SINE (AluYb8) | 1 |
chr2:63 552 086 | 325 | SINE (AluYb8) | 1 |
chr2:65 106 650 | 305 | SINE (AluYc) | 1 |
chr2:65 339 115 | 49 | Retroposon (SVA_F) | 1 |
chr2:73 898 352 | 319 | SINE (AluY) | 1 |
chr2:82 938 170 | 40 | LTR (LTR12C) | 1 |
chr2:84 501 625 | 312 | SINE (AluYg6) | 1 |
chr2:84 608 279 | 37 | DNA (Tigger1) | 1 |
chr2:87 180 576 | 494 | LINE (L1HS) | 1 |
chr2:99 820 750 | 331 | SINE (AluYa5) | 1 |
chr2:119 660 918 | 113 | LINE (L1MC4a) | 1 |
chr2:122 573 068 | 317 | SINE (AluYa5) | 1 |
chr2:125 422 749 | 118 | LTR (LTR12C) | 1 |
chr2:125 613 138 | 332 | SINE (AluYa5) | 1 |
chr2:127 119 830 | 466 | Retroposon (SVA_F) | 1 |
chr2:127 981 354 | 120 | LTR (LTR21B) | 1 |
chr2:129 685 907 | 1 423 | LINE (L1HS) | 1 |
chr2:137 419 414 | 60 | SINE (AluY) | 1 |
chr2:144 589 184 | 324 | SINE (AluYb8) | 1 |
chr2:149 907 736 | 326 | SINE (AluYb8) | 1 |
chr2:151 875 949 | 48 | Retroposon (SVA_F) | 1 |
chr2:152 391 750 | 328 | SINE (AluYg6) | 1 |
chr2:153 304 155 | 320 | SINE (AluY) | 1 |
chr2:156 293 597 | 39 | Retroposon (SVA_B) | 1 |
chr2:156 368 679 | 49 | Retroposon (SVA_F) | 1 |
chr2:156 369 102 | 47 | Retroposon (SVA_F) | 1 |
chr2:161 095 804 | 300 | SINE (AluSx) | 1 |
chr2:171 866 625 | 418 | Retroposon (SVA_F) | 1 |
chr2:172 657 428 | 138 | SINE (AluYa5) | 1 |
chr2:174 871 203 | 318 | SINE (AluYa5) | 1 |
chr2:188 711 105 | 90 | LTR (MER11B) | 1 |
chr2:189 094 694 | 311 | SINE (AluYa5) | 1 |
chr2:191 398 210 | 301 | Retroposon (SVA_E) | 1 |
chr2:191 742 669 | 48 | Retroposon (SVA_F) | 1 |
chr2:207 607 676 | 324 | SINE (AluJb) | 1 |
chr2:212 060 586 | 327 | SINE (AluYa5) | 1 |
chr2:214 336 906 | 324 | SINE (AluYb8) | 1 |
chr2:214 835 366 | 420 | Retroposon (SVA_F) | 1 |
chr2:221 579 722 | 36 | SINE (AluSg4) | 1 |
chr2:231 558 287 | 319 | SINE (AluYk2) | 1 |
chr2:232 246 906 | 128 | LINE (L1MD3) | 1 |
chr2:232 981 165 | 311 | SINE (AluYa5) | 1 |
chr3:10 070 475 | 212 | Retroposon (SVA_F) | 1 |
chr3:12 095 549 | 323 | SINE (AluY) | 1 |
chr3:17 776 004 | 79 | LTR (HERV9N-int) | 1 |
chr3:18 993 945 | 330 | SINE (AluYb9) | 1 |
chr3:31 839 889 | 327 | SINE (AluYb8) | 1 |
chr3:34 674 943 | 40 | LINE (L1MA1) | 1 |
chr3:35 469 102 | 66 | LTR (LTR12_v) | 1 |
chr3:36 797 653 | 305 | SINE (AluYc) | 1 |
chr3:38 358 205 | 290 | SINE (AluYb8) | 1 |
chr3:41 983 158 | 45 | Retroposon (SVA_F) | 1 |
chr3:45 501 159 | 316 | SINE (AluY) | 1 |
chr3:48 483 710 | 47 | Retroposon (SVA_F) | 1 |
chr3:50 841 727 | 344 | SINE (AluY) | 1 |
chr3:53 465 971 | 338 | SINE (AluY) | 1 |
chr3:58 290 566 | 39 | Retroposon (SVA_B) | 1 |
chr3:61 671 741 | 177 | Retroposon (SVA_A) | 1 |
chr3:63 555 273 | 311 | SINE (AluYb8) | 1 |
chr3:66 713 359 | 136 | SINE (AluJr4) | 1 |
chr3:66 917 047 | 131 | LINE (L1P3) | 1 |
chr3:75 289 661 | 223 | Retroposon (SVA_F) | 1 |
chr3:80 248 694 | 45 | LINE (L1PREC2) | 1 |
chr3:83 254 913 | 137 | SINE (AluY) | 1 |
chr3:83 707 508 | 254 | LINE (L1PA8A) | 1 |
chr3:91 345 077 | 143 | LTR (MLT1D) | 1 |
chr3:91 361 104 | 243 | LINE (L1MEg) | 1 |
chr3:95 745 262 | 46 | Retroposon (SVA_B) | 1 |
chr3:98 183 493 | 232 | LTR (LTR8) | 1 |
chr3:100 458 409 | 311 | SINE (AluYa5) | 1 |
chr3:106 315 594 | 74 | LTR (MER65-int) | 1 |
chr3:106 508 513 | 28 | DNA (HSMAR2) | 1 |
chr3:111 507 517 | 327 | SINE (AluYb9) | 1 |
chr3:112 205 623 | 49 | LINE (L1P3) | 1 |
chr3:124 687 657 | 317 | SINE (AluYa5) | 1 |
chr3:124 922 699 | 135 | SINE (AluJr4) | 1 |
chr3:129 339 080 | 47 | Retroposon (SVA_B) | 1 |
chr3:130 219 573 | 317 | SINE (AluYe5) | 1 |
chr3:134 199 962 | 38 | LTR (LTR12_v) | 1 |
chr3:136 893 195 | 107 | LINE (L1P5) | 1 |
chr3:140 805 580 | 318 | SINE (AluYa5) | 1 |
chr3:143 047 267 | 176 | Retroposon (SVA_F) | 1 |
chr3:157 848 540 | 37 | SINE (Alu) | 1 |
chr3:174 211 587 | 119 | LTR (LTR12C) | 1 |
chr3:174 211 749 | 118 | LTR (LTR12C) | 1 |
chr3:174 796 725 | 243 | LINE (L1P5) | 1 |
chr3:176 425 229 | 303 | SINE (AluYa5) | 1 |
chr3:186 751 272 | 276 | SINE (AluY) | 1 |
chr3:189 165 421 | 322 | SINE (AluYb8) | 1 |
chr3:191 281 660 | 319 | SINE (AluYa5) | 1 |
chr3:191 390 410 | 77 | LTR (MER41B) | 1 |
chr3:196 762 150 | 40 | Retroposon (SVA_C) | 1 |
chr3:197 727 989 | 71 | SINE (AluJb) | 1 |
chr3:197 823 074 | 32 | SINE (Alu) | 1 |
chr4:4 349 001 | 65 | LTR (LTR12_v) | 1 |
chr4:9 449 339 | 137 | LINE (L1M3) | 1 |
chr4:12 237 650 | 137 | SINE (AluYb8) | 1 |
chr4:13 761 218 | 145 | Retroposon (SVA_C) | 1 |
chr4:15 615 472 | 237 | LTR (LTR12C) | 1 |
chr4:26 436 994 | 318 | SINE (AluYa5) | 1 |
chr4:43 846 685 | 40 | LTR (LTR12E) | 1 |
chr4:44 963 887 | 36 | LTR (LTR3B_v) | 1 |
chr4:45 208 406 | 110 | Retroposon (SVA_A) | 1 |
chr4:46 378 044 | 301 | Retroposon (SVA_F) | 1 |
chr4:48 292 726 | 44 | Retroposon (SVA_F) | 1 |
chr4:52 081 949 | 147 | LINE (L3) | 1 |
chr4:52 465 595 | 47 | Retroposon (SVA_F) | 1 |
chr4:53 237 856 | 44 | Retroposon (SVA_F) | 1 |
chr4:54 154 800 | 160 | LTR (LTR12C) | 1 |
chr4:54 993 958 | 159 | LTR (LTR12C) | 1 |
chr4:60 959 376 | 325 | SINE (AluYb8) | 1 |
chr4:63 062 067 | 184 | LTR (LTR12E) | 1 |
chr4:64 351 027 | 290 | SINE (AluY) | 1 |
chr4:66 240 879 | 316 | SINE (AluY) | 1 |
chr4:67 098 159 | 314 | SINE (AluY) | 1 |
chr4:68 520 089 | 151 | SINE (AluYb8) | 1 |
chr4:71 863 495 | 146 | LTR (HERVK9-int) | 1 |
chr4:75 861 613 | 324 | SINE (AluYa5) | 1 |
chr4:78 238 350 | 322 | SINE (AluY) | 1 |
chr4:83 186 020 | 48 | Retroposon (SVA_F) | 1 |
chr4:85 877 580 | 34 | SINE (Alu) | 1 |
chr4:108 659 089 | 29 | SINE (Alu) | 1 |
chr4:111 777 267 | 327 | SINE (AluYa5) | 1 |
chr4:113 097 092 | 312 | SINE (AluYe5) | 1 |
chr4:119 718 737 | 318 | SINE (AluYa5) | 1 |
chr4:125 566 477 | 63 | LTR (HERVH-int) | 1 |
chr4:133 675 266 | 414 | LINE (L1HS) | 1 |
chr4:134 214 179 | 411 | LTR (HERVL40-int) | 1 |
chr4:138 304 044 | 322 | SINE (AluY) | 1 |
chr4:141 691 105 | 48 | LTR (THE1D) | 1 |
chr4:144 474 138 | 326 | SINE (AluYa5) | 1 |
chr4:145 694 258 | 79 | Retroposon (SVA_F) | 1 |
chr4:145 694 536 | 76 | Retroposon (SVA_F) | 1 |
chr4:147 132 785 | 322 | SINE (AluY) | 1 |
chr4:150 372 751 | 324 | SINE (AluYk11) | 1 |
chr4:150 660 232 | 97 | Retroposon (SVA_F) | 1 |
chr4:150 953 970 | 79 | Retroposon (SVA_A) | 1 |
chr4:151 214 784 | 126 | Retroposon (SVA_F) | 1 |
chr4:153 267 093 | 319 | SINE (AluYe5) | 1 |
chr4:159 524 188 | 126 | Retroposon (SVA_F) | 1 |
chr4:163 836 593 | 223 | SINE (AluYd8) | 1 |
chr4:173 123 062 | 319 | SINE (AluY) | 1 |
chr4:175 181 016 | 62 | LINE (L1PREC2) | 1 |
chr4:178 523 564 | 314 | SINE (AluYi6) | 1 |
chr4:185 440 757 | 302 | SINE (AluYa5) | 1 |
chr4:185 460 990 | 286 | SINE (AluYk12) | 1 |
chr4:189 404 991 | 71 | LTR (MST-int) | 1 |
chr5:1 586 020 | 39 | Retroposon (SVA_D) | 1 |
chr5:1 812 525 | 312 | SINE (AluYa5) | 1 |
chr5:6 217 973 | 311 | SINE (AluY) | 1 |
chr5:12 319 688 | 29 | LINE (L1PA14) | 1 |
chr5:16 277 337 | 38 | Retroposon (SVA_D) | 1 |
chr5:16 716 503 | 310 | SINE (AluYg6) | 1 |
chr5:17 024 109 | 182 | SINE (AluSx) | 1 |
chr5:20 471 978 | 279 | LINE (L2a) | 1 |
chr5:27 571 886 | 122 | SINE (AluJb) | 1 |
chr5:28 929 584 | 73 | Retroposon (SVA_B) | 1 |
chr5:43 541 686 | 321 | SINE (AluYb8) | 1 |
chr5:55 433 459 | 354 | SINE (AluY) | 1 |
chr5:56 393 653 | 296 | SINE (AluYb8) | 1 |
chr5:56 632 138 | 310 | SINE (AluYa5) | 1 |
chr5:64 476 133 | 47 | LINE (L1P2) | 1 |
chr5:65 940 655 | 49 | Retroposon (SVA_F) | 1 |
chr5:68 967 632 | 650 | LINE (L1HS) | 1 |
chr5:69 063 800 | 61 | Retroposon (SVA_D) | 1 |
chr5:69 515 538 | 97 | Retroposon (SVA_F) | 1 |
chr5:71 552 122 | 39 | Retroposon (SVA_E) | 1 |
chr5:77 043 481 | 48 | Retroposon (SVA_F) | 1 |
chr5:84 943 815 | 677 | LINE (L1HS) | 1 |
chr5:87 076 864 | 294 | SINE (AluYa5) | 1 |
chr5:111 450 624 | 186 | SINE (AluYc) | 1 |
chr5:115 404 024 | 285 | SINE (AluYe5) | 1 |
chr5:131 517 546 | 328 | SINE (AluYb8) | 1 |
chr5:134 427 218 | 305 | SINE (AluYa5) | 1 |
chr5:135 688 029 | 36 | LINE (L1MB3) | 1 |
chr5:137 538 132 | 175 | Retroposon (SVA_F) | 1 |
chr5:142 537 961 | 312 | SINE (AluYa5) | 1 |
chr5:146 990 048 | 318 | SINE (AluYb8) | 1 |
chr5:151 982 651 | 48 | LINE (L1PBa) | 1 |
chr5:152 743 990 | 315 | SINE (AluYa5) | 1 |
chr5:170 774 320 | 310 | SINE (AluYa5) | 1 |
chr5:178 458 165 | 62 | LINE (L1MC5) | 1 |
chr5:178 660 755 | 31 | SINE (Alu) | 1 |
chr6:5 348 526 | 320 | SINE (AluY) | 1 |
chr6:6 436 492 | 31 | LTR (LTR9D) | 1 |
chr6:11 896 739 | 37 | LINE (L1MC) | 1 |
chr6:13 521 018 | 330 | SINE (AluYb8) | 1 |
chr6:15 726 522 | 39 | Retroposon (SVA_E) | 1 |
chr6:18 898 917 | 314 | SINE (AluY) | 1 |
chr6:19 136 861 | 320 | SINE (AluYb8) | 1 |
chr6:21 851 912 | 125 | Retroposon (SVA_A) | 1 |
chr6:23 779 244 | 313 | SINE (AluYa5) | 1 |
chr6:31 853 911 | 176 | Retroposon (SVA_D) | 1 |
chr6:37 000 763 | 324 | SINE (AluYb8) | 1 |
chr6:43 927 736 | 314 | SINE (AluYa5) | 1 |
chr6:45 292 724 | 324 | SINE (AluYe5) | 1 |
chr6:48 847 449 | 34 | LINE (L1PB) | 1 |
chr6:49 487 167 | 100 | LINE (L1MC5) | 1 |
chr6:51 037 318 | 34 | LINE (L1P3) | 1 |
chr6:52 969 272 | 72 | SINE (AluSq2) | 1 |
chr6:63 052 338 | 84 | LINE (L1PREC2) | 1 |
chr6:64 312 982 | 307 | LINE (L1P3) | 1 |
chr6:69 061 778 | 55 | LINE (L1ME1) | 1 |
chr6:77 679 471 | 37 | DNA (Tigger3c) | 1 |
chr6:88 947 736 | 107 | Retroposon (SVA_F) | 1 |
chr6:96 497 728 | 68 | LINE (L1P3) | 1 |
chr6:96 639 702 | 97 | LINE (L1P1) | 1 |
chr6:99 650 404 | 39 | Retroposon (SVA_F) | 1 |
chr6:104 324 781 | 314 | SINE (AluYa5) | 1 |
chr6:114 768 705 | 105 | SINE (AluSc) | 1 |
chr6:118 304 984 | 295 | SINE (AluYa5) | 1 |
chr6:118 500 450 | 35 | LTR (LTR3A) | 1 |
chr6:120 247 100 | 318 | SINE (AluYb8) | 1 |
chr6:125 100 266 | 309 | SINE (AluYa5) | 1 |
chr6:130 792 122 | 323 | SINE (AluYb8) | 1 |
chr6:130 952 342 | 320 | SINE (AluYb8) | 1 |
chr6:136 933 052 | 276 | SINE (AluYa5) | 1 |
chr6:141 014 728 | 131 | LTR (LTR12) | 1 |
chr6:155 996 968 | 307 | SINE (AluY) | 1 |
chr6:157 076 539 | 327 | SINE (AluYb8) | 1 |
chr6:158 127 369 | 303 | Retroposon (SVA_F) | 1 |
chr6:158 349 077 | 263 | Retroposon (SVA_A) | 1 |
chr6:163 393 182 | 320 | SINE (AluYe6) | 1 |
chr7:902 456 | 174 | SINE (AluSx) | 1 |
chr7:1 146 588 | 195 | Retroposon (SVA_F) | 1 |
chr7:2 268 715 | 127 | Retroposon (SVA_F) | 1 |
chr7:10 465 264 | 352 | Retroposon (SVA_F) | 1 |
chr7:25 019 560 | 227 | Retroposon (SVA_F) | 1 |
chr7:36 212 541 | 319 | SINE (AluYa5) | 1 |
chr7:37 292 933 | 128 | Retroposon (SVA_F) | 1 |
chr7:39 710 093 | 329 | SINE (AluYb8) | 1 |
chr7:44 992 612 | 202 | Retroposon (SVA_C) | 1 |
chr7:56 177 209 | 321 | SINE (AluYb8) | 1 |
chr7:64 809 505 | 125 | Retroposon (SVA_F) | 1 |
chr7:66 613 315 | 315 | SINE (AluYa5) | 1 |
chr7:67 889 015 | 38 | Retroposon (SVA_D) | 1 |
chr7:71 737 530 | 107 | LTR (LTR12C) | 1 |
chr7:76 937 894 | 319 | SINE (AluYa5) | 1 |
chr7:77 534 007 | 174 | Retroposon (SVA_F) | 1 |
chr7:81 043 634 | 40 | LTR (LTR12C) | 1 |
chr7:82 372 562 | 326 | SINE (AluYj4) | 1 |
chr7:82 801 191 | 316 | SINE (AluYa5) | 1 |
chr7:83 460 626 | 63 | LTR (HERVH-int) | 1 |
chr7:84 299 804 | 69 | SINE (AluY) | 1 |
chr7:85 272 406 | 271 | LINE (L1HS) | 1 |
chr7:88 751 024 | 316 | SINE (AluYa5) | 1 |
chr7:101 359 185 | 224 | Retroposon (SVA_A) | 1 |
chr7:102 549 902 | 83 | SINE (AluJb) | 1 |
chr7:109 017 025 | 51 | LINE (L1PREC2) | 1 |
chr7:109 643 279 | 328 | SINE (AluYb8) | 1 |
chr7:114 192 070 | 49 | SINE (AluSx4) | 1 |
chr7:118 443 246 | 316 | SINE (AluYe5) | 1 |
chr7:118 668 421 | 68 | LINE (L1M4) | 1 |
chr7:128 289 264 | 315 | SINE (AluYi6) | 1 |
chr7:128 553 005 | 33 | SINE (AluSq) | 1 |
chr7:129 476 202 | 92 | Retroposon (SVA_F) | 1 |
chr7:129 517 319 | 317 | SINE (AluSx) | 1 |
chr7:131 224 137 | 144 | SINE (AluJb) | 1 |
chr7:136 576 160 | 317 | LTR (HERVL-int) | 1 |
chr7:139 101 477 | 374 | Retroposon (SVA_A) | 1 |
chr7:152 540 441 | 130 | SINE (AluSx) | 1 |
chr7:154 590 557 | 330 | SINE (AluYb8) | 1 |
chr7:158 309 263 | 33 | LTR (MLT2A2) | 1 |
chr8:6 196 793 | 92 | LINE (L1P2) | 1 |
chr8:9 153 999 | 48 | Retroposon (SVA_F) | 1 |
chr8:9 950 379 | 325 | SINE (AluYb8) | 1 |
chr8:10 468 757 | 324 | SINE (AluYa5) | 1 |
chr8:12 641 514 | 329 | SINE (AluYa5) | 1 |
chr8:13 059 195 | 154 | SINE (AluSx4) | 1 |
chr8:16 245 296 | 274 | SINE (AluYa5) | 1 |
chr8:23 213 553 | 39 | SINE (Alu) | 1 |
chr8:24 921 586 | 312 | SINE (AluYd8) | 1 |
chr8:25 315 133 | 301 | SINE (AluYa5) | 1 |
chr8:41 299 575 | 135 | SINE (AluSq) | 1 |
chr8:41 412 938 | 324 | SINE (AluYb8) | 1 |
chr8:43 179 661 | 97 | Retroposon (SVA_F) | 1 |
chr8:54 125 410 | 185 | Retroposon (SVA_F) | 1 |
chr8:61 752 506 | 99 | Retroposon (SVA_F) | 1 |
chr8:64 686 418 | 75 | Retroposon (SVA_F) | 1 |
chr8:66 232 695 | 175 | Retroposon (SVA_F) | 1 |
chr8:73 845 055 | 41 | Retroposon (SVA_C) | 1 |
chr8:74 463 097 | 319 | SINE (AluYa5) | 1 |
chr8:86 302 813 | 113 | LINE (L1HS) | 1 |
chr8:86 583 026 | 33 | SINE (Alu) | 1 |
chr8:86 964 152 | 73 | LTR (MER52-int) | 1 |
chr8:89 657 666 | 339 | SINE (AluYb8) | 1 |
chr8:94 591 087 | 47 | Retroposon (SVA_F) | 1 |
chr8:97 447 378 | 31 | SINE (Alu) | 1 |
chr8:97 841 152 | 39 | Retroposon (SVA_D) | 1 |
chr8:106 195 649 | 310 | SINE (AluYb9) | 1 |
chr8:116 034 779 | 276 | SINE (AluYg6) | 1 |
chr8:123 667 928 | 320 | SINE (AluYa5) | 1 |
chr8:124 877 714 | 283 | SINE (AluYa5) | 1 |
chr8:138 313 721 | 313 | SINE (AluY) | 1 |
chr8:140 037 950 | 334 | SINE (AluYa5) | 1 |
chr8:140 501 180 | 189 | LINE (L2) | 1 |
chr9:262 447 | 326 | SINE (AluYa5) | 1 |
chr9:2 298 287 | 190 | LINE (L2a) | 1 |
chr9:6 808 085 | 48 | Retroposon (SVA_F) | 1 |
chr9:7 852 522 | 326 | SINE (AluYb9) | 1 |
chr9:8 102 217 | 79 | LINE (L1P4) | 1 |
chr9:8 645 762 | 274 | SINE (AluYa5) | 1 |
chr9:15 365 452 | 116 | LTR (LTR12D) | 1 |
chr9:21 038 486 | 330 | SINE (AluYa5) | 1 |
chr9:21 127 606 | 30 | LINE (L1P1) | 1 |
chr9:22 288 707 | 334 | SINE (AluYa5) | 1 |
chr9:28 960 604 | 324 | SINE (AluY) | 1 |
chr9:31 796 037 | 43 | LINE (L1M3) | 1 |
chr9:34 904 795 | 103 | LINE (L1PB) | 1 |
chr9:65 948 586 | 315 | SINE (AluYb8) | 1 |
chr9:74 197 755 | 61 | Retroposon (SVA_F) | 1 |
chr9:104 235 321 | 37 | Retroposon (SVA_F) | 1 |
chr9:120 292 891 | 314 | SINE (AluYk2) | 1 |
chr9:123 802 496 | 79 | LINE (L2) | 1 |
chr9:125 577 664 | 256 | Retroposon (SVA_F) | 1 |
chr9:125 780 971 | 115 | Retroposon (SVA_D) | 1 |
chr9:129 514 654 | 70 | LTR (MER52A) | 1 |
chr9:131 370 207 | 66 | SINE (Alu) | 1 |
chr9:136 074 444 | 477 | SINE (AluY) | 1 |
chr10:1 250 037 | 326 | SINE (AluYa5) | 1 |
chr10:2 035 347 | 314 | SINE (AluYa5) | 1 |
chr10:9 469 017 | 318 | SINE (AluYa5) | 1 |
chr10:12 331 317 | 335 | SINE (AluYg6) | 1 |
chr10:21 737 162 | 35 | SINE (AluJb) | 1 |
chr10:25 756 463 | 209 | LTR (LTR12C) | 1 |
chr10:28 813 597 | 312 | SINE (AluYa5) | 1 |
chr10:32 647 469 | 55 | SINE (FRAM) | 1 |
chr10:39 479 346 | 341 | LINE (L1P1) | 1 |
chr10:53 046 194 | 313 | SINE (AluYe5) | 1 |
chr10:54 167 758 | 82 | LTR (HERVH-int) | 1 |
chr10:54 223 519 | 321 | SINE (AluYa5) | 1 |
chr10:55 142 592 | 316 | SINE (AluYa5) | 1 |
chr10:56 214 858 | 313 | SINE (AluYa5) | 1 |
chr10:56 724 090 | 48 | SINE (AluYh7) | 1 |
chr10:59 225 142 | 323 | SINE (AluYa5) | 1 |
chr10:67 842 630 | 35 | LTR (MSTB2) | 1 |
chr10:68 235 132 | 325 | SINE (AluYb8) | 1 |
chr10:69 850 403 | 310 | SINE (AluYa5) | 1 |
chr10:69 992 835 | 492 | Retroposon (SVA_F) | 1 |
chr10:70 239 938 | 110 | Retroposon (SVA_A) | 1 |
chr10:70 407 981 | 321 | Retroposon (SVA_E) | 1 |
chr10:74 470 576 | 142 | LINE (L1M3) | 1 |
chr10:86 203 533 | 304 | SINE (AluY) | 1 |
chr10:92 975 818 | 222 | Retroposon (SVA_A) | 1 |
chr10:95 908 766 | 315 | SINE (AluYa5) | 1 |
chr10:99 625 151 | 101 | LTR (LTR12) | 1 |
chr10:104 057 441 | 192 | SINE (AluYb8) | 1 |
chr10:104 807 120 | 328 | SINE (AluY) | 1 |
chr10:118 895 635 | 40 | Retroposon (SVA_E) | 1 |
chr10:120 798 697 | 39 | Retroposon (SVA_F) | 1 |
chr10:122 976 473 | 319 | SINE (AluY) | 1 |
chr10:126 576 658 | 66 | LINE (L1M2) | 1 |
chr10:130 096 568 | 97 | LINE (L1PA7) | 1 |
chr11:428 013 | 320 | SINE (AluYe5) | 1 |
chr11:696 731 | 133 | SINE (AluJb) | 1 |
chr11:1 576 987 | 66 | SINE (AluJb) | 1 |
chr11:2 238 145 | 61 | LTR (ERVL-B4-int) | 1 |
chr11:2 332 515 | 39 | Retroposon (SVA_B) | 1 |
chr11:3 246 565 | 143 | SINE (AluYa5) | 1 |
chr11:5 194 336 | 40 | LTR (LTR12E) | 1 |
chr11:5 496 348 | 46 | LTR (MER88) | 1 |
chr11:5 863 905 | 317 | SINE (AluY) | 1 |
chr11:10 615 934 | 316 | SINE (AluYb8) | 1 |
chr11:17 050 709 | 39 | Retroposon (SVA_F) | 1 |
chr11:22 241 253 | 123 | LINE (L1PA16) | 1 |
chr11:37 684 733 | 328 | SINE (AluY) | 1 |
chr11:38 779 509 | 323 | SINE (AluYa5) | 1 |
chr11:41 072 280 | 87 | DNA (Tigger1) | 1 |
chr11:41 304 081 | 47 | Retroposon (SVA_F) | 1 |
chr11:47 097 418 | 48 | Retroposon (SVA_F) | 1 |
chr11:47 429 529 | 41 | SINE (AluJb) | 1 |
chr11:48 911 556 | 313 | SINE (AluY) | 1 |
chr11:55 641 412 | 317 | SINE (AluY) | 1 |
chr11:56 535 869 | 317 | SINE (AluYg6) | 1 |
chr11:58 139 863 | 64 | LINE (L1P2) | 1 |
chr11:61 377 728 | 310 | SINE (AluYk12) | 1 |
chr11:63 893 355 | 259 | LINE (L1MB8) | 1 |
chr11:63 931 433 | 307 | SINE (AluSx) | 1 |
chr11:65 736 003 | 313 | SINE (AluY) | 1 |
chr11:67 655 022 | 311 | SINE (AluY) | 1 |
chr11:74 066 263 | 48 | LINE (L1PA5) | 1 |
chr11:74 353 859 | 76 | Retroposon (SVA_C) | 1 |
chr11:74 556 414 | 59 | SINE (AluJb) | 1 |
chr11:74 656 965 | 91 | LINE (L1M1) | 1 |
chr11:76 619 299 | 607 | Retroposon (SVA_F) | 1 |
chr11:77 098 059 | 176 | Retroposon (SVA_F) | 1 |
chr11:77 098 729 | 223 | Retroposon (SVA_D) | 1 |
chr11:90 267 331 | 185 | LINE (L1P3) | 1 |
chr11:91 420 412 | 177 | SINE (AluYc) | 1 |
chr11:92 875 310 | 313 | SINE (AluY) | 1 |
chr11:93 621 562 | 51 | LTR (THE1D) | 1 |
chr11:94 125 546 | 48 | LTR (LTR12_v) | 1 |
chr11:95 135 520 | 42 | SINE (Alu) | 1 |
chr11:98 423 433 | 79 | LTR (HERV9N-int) | 1 |
chr11:98 770 105 | 208 | Retroposon (SVA_C) | 1 |
chr11:103 330 537 | 322 | SINE (AluYb8) | 1 |
chr11:104 915 861 | 320 | SINE (AluYa5) | 1 |
chr11:106 173 850 | 314 | SINE (AluYa5) | 1 |
chr11:106 195 313 | 136 | SINE (AluSx) | 1 |
chr11:106 299 739 | 331 | SINE (AluYa5) | 1 |
chr11:111 211 677 | 42 | LINE (L1MC) | 1 |
chr11:116 130 944 | 212 | LTR (HERVIP10FH-int) | 1 |
chr11:119 253 538 | 266 | Retroposon (SVA_A) | 1 |
chr11:120 341 328 | 37 | SINE (AluYm1) | 1 |
chr11:125 863 433 | 298 | Retroposon (SVA_F) | 1 |
chr11:125 863 736 | 127 | Retroposon (SVA_F) | 1 |
chr11:125 863 877 | 128 | Retroposon (SVA_F) | 1 |
chr11:131 308 284 | 135 | SINE (AluSz) | 1 |
chr11:134 435 747 | 315 | LINE (L1HS) | 1 |
chr12:676 194 | 133 | SINE (AluYk2) | 1 |
chr12:5 660 428 | 308 | SINE (AluYd8) | 1 |
chr12:10 081 587 | 318 | SINE (AluY) | 1 |
chr12:19 653 272 | 283 | SINE (AluYa5) | 1 |
chr12:21 970 847 | 320 | SINE (AluYa5) | 1 |
chr12:23 389 734 | 38 | LINE (L1P2) | 1 |
chr12:26 784 948 | 38 | Retroposon (SVA_D) | 1 |
chr12:29 411 807 | 33 | LINE (L1P1) | 1 |
chr12:29 670 962 | 313 | SINE (AluYa5) | 1 |
chr12:31 650 021 | 315 | SINE (AluSx) | 1 |
chr12:32 098 864 | 145 | SINE (AluSx) | 1 |
chr12:34 050 018 | 115 | LINE (L1PBa) | 1 |
chr12:38 984 434 | 302 | SINE (AluYa5) | 1 |
chr12:43 524 175 | 1 074 | LINE (L1PBb) | 1 |
chr12:45 025 762 | 311 | SINE (AluYa5) | 1 |
chr12:45 652 512 | 323 | SINE (AluYb8) | 1 |
chr12:48 842 090 | 39 | Retroposon (SVA_D) | 1 |
chr12:56 558 296 | 307 | SINE (AluSz6) | 1 |
chr12:57 665 191 | 155 | Retroposon (SVA_A) | 1 |
chr12:57 965 273 | 323 | SINE (AluYg6) | 1 |
chr12:58 064 422 | 312 | SINE (AluYa5) | 1 |
chr12:63 686 932 | 117 | Retroposon (SVA_A) | 1 |
chr12:64 029 802 | 87 | SINE (AluSz6) | 1 |
chr12:64 783 847 | 187 | SINE (AluSp) | 1 |
chr12:70 086 200 | 63 | LTR (HERVH-int) | 1 |
chr12:71 725 887 | 27 | DNA (HSMAR2) | 1 |
chr12:78 003 152 | 327 | SINE (AluYb8) | 1 |
chr12:78 605 707 | 302 | SINE (AluYb8) | 1 |
chr12:85 112 496 | 779 | LINE (L1HS) | 1 |
chr12:87 477 036 | 315 | SINE (AluY) | 1 |
chr12:92 118 739 | 28 | DNA (HSMAR2) | 1 |
chr12:96 311 583 | 317 | SINE (AluYa5) | 1 |
chr12:100 294 348 | 196 | Retroposon (SVA_E) | 1 |
chr12:100 294 427 | 198 | Retroposon (SVA_E) | 1 |
chr12:106 209 872 | 284 | LINE (L1P3) | 1 |
chr12:106 272 427 | 275 | SINE (AluSx) | 1 |
chr12:127 906 519 | 115 | LINE (L1M5) | 1 |
chr12:131 926 418 | 79 | Retroposon (SVA_F) | 1 |
chr12:132 789 672 | 57 | SINE (FLAM_C) | 1 |
chr12:132 868 572 | 181 | SINE (AluY) | 1 |
chr13:18 196 939 | 196 | SINE (AluYb8) | 1 |
chr13:19 032 018 | 330 | SINE (AluYb9) | 1 |
chr13:19 251 656 | 416 | LINE (L1PBa) | 1 |
chr13:19 779 535 | 49 | Retroposon (SVA_F) | 1 |
chr13:21 448 216 | 146 | Retroposon (SVA_E) | 1 |
chr13:21 448 382 | 77 | Retroposon (SVA_A) | 1 |
chr13:21 448 560 | 48 | Retroposon (SVA_F) | 1 |
chr13:22 858 998 | 46 | Retroposon (SVA_F) | 1 |
chr13:26 806 346 | 187 | Retroposon (SVA_E) | 1 |
chr13:31 581 598 | 176 | LINE (L1P1) | 1 |
chr13:37 215 550 | 166 | SINE (AluSx) | 1 |
chr13:40 955 541 | 97 | Retroposon (SVA_F) | 1 |
chr13:42 141 027 | 28 | LINE (L1PA5) | 1 |
chr13:46 515 507 | 93 | Retroposon (SVA_F) | 1 |
chr13:46 515 532 | 77 | Retroposon (SVA_F) | 1 |
chr13:46 521 202 | 318 | SINE (AluYa5) | 1 |
chr13:49 599 221 | 313 | SINE (AluYk12) | 1 |
chr13:58 773 222 | 85 | LTR (LTR12C) | 1 |
chr13:58 822 746 | 316 | SINE (AluYg6) | 1 |
chr13:61 213 266 | 322 | SINE (AluYa5) | 1 |
chr13:67 329 321 | 236 | SINE (AluYe5) | 1 |
chr13:68 249 657 | 107 | SINE (AluJb) | 1 |
chr13:78 697 449 | 317 | SINE (AluYa5) | 1 |
chr13:81 236 046 | 329 | SINE (AluYb8) | 1 |
chr13:81 973 306 | 108 | LTR (MLT1A1) | 1 |
chr13:85 592 308 | 167 | SINE (AluYa5) | 1 |
chr13:86 740 691 | 288 | SINE (AluYa5) | 1 |
chr13:87 043 983 | 254 | SINE (AluYe5) | 1 |
chr13:90 291 101 | 57 | LTR (HERVP71A-int) | 1 |
chr13:90 295 387 | 322 | SINE (AluYb8) | 1 |
chr13:91 509 403 | 323 | SINE (AluYb8) | 1 |
chr13:93 176 152 | 306 | SINE (AluYa5) | 1 |
chr13:99 242 793 | 39 | Retroposon (SVA_B) | 1 |
chr13:99 430 356 | 319 | SINE (AluY) | 1 |
chr13:105 062 568 | 289 | SINE (AluYb8) | 1 |
chr13:107 887 391 | 62 | LTR (MSTA) | 1 |
chr13:109 235 196 | 60 | LTR (THE1A) | 1 |
chr13:109 311 502 | 36 | Retroposon (SVA_A) | 1 |
chr13:110 424 447 | 319 | SINE (AluYa5) | 1 |
chr13:110 959 392 | 246 | SINE (AluY) | 1 |
chr13:112 866 638 | 312 | SINE (AluYa5) | 1 |
chr13:113 357 053 | 132 | SINE (AluSc) | 1 |
chr14:24 212 553 | 164 | SINE (AluSx4) | 1 |
chr14:25 599 582 | 40 | LTR (LTR12B) | 1 |
chr14:27 832 044 | 438 | LINE (L1HS) | 1 |
chr14:31 408 946 | 35 | SINE (AluYb8) | 1 |
chr14:40 110 466 | 324 | SINE (AluYa5) | 1 |
chr14:40 123 223 | 131 | SINE (AluYe5) | 1 |
chr14:40 608 056 | 43 | LINE (L1M2) | 1 |
chr14:45 389 760 | 269 | Retroposon (SVA_F) | 1 |
chr14:54 349 008 | 319 | SINE (AluYb8) | 1 |
chr14:54 800 768 | 28 | LINE (L1P3) | 1 |
chr14:55 971 191 | 283 | SINE (AluYa5) | 1 |
chr14:59 987 436 | 327 | SINE (AluYb8) | 1 |
chr14:60 108 767 | 313 | SINE (AluYa5) | 1 |
chr14:70 397 965 | 57 | LTR (MER52D) | 1 |
chr14:73 557 102 | 311 | SINE (AluSx) | 1 |
chr14:75 032 863 | 321 | SINE (AluYa5) | 1 |
chr14:76 750 484 | 49 | Retroposon (SVA_A) | 1 |
chr14:85 829 872 | 39 | Retroposon (SVA_E) | 1 |
chr14:94 558 266 | 312 | SINE (AluYa5) | 1 |
chr14:98 678 770 | 53 | SINE (Alu) | 1 |
chr14:100 345 059 | 96 | Retroposon (SVA_F) | 1 |
chr14:102 676 499 | 166 | Retroposon (SVA_F) | 1 |
chr15:20 247 336 | 139 | SINE (AluJb) | 1 |
chr15:27 520 633 | 324 | SINE (AluYb8) | 1 |
chr15:35 656 781 | 51 | Retroposon (SVA_F) | 1 |
chr15:36 554 711 | 346 | SINE (AluYa5) | 1 |
chr15:40 422 765 | 181 | SINE (AluYa5) | 1 |
chr15:40 808 119 | 315 | SINE (AluYg6) | 1 |
chr15:43 076 793 | 126 | Retroposon (SVA_F) | 1 |
chr15:44 209 803 | 289 | SINE (AluYb8) | 1 |
chr15:45 290 055 | 31 | SINE (Alu) | 1 |
chr15:45 293 032 | 48 | Retroposon (SVA_F) | 1 |
chr15:47 279 102 | 86 | LINE (L1P1) | 1 |
chr15:56 541 721 | 295 | SINE (AluY) | 1 |
chr15:60 924 332 | 317 | SINE (AluY) | 1 |
chr15:71 757 533 | 133 | SINE (AluJo) | 1 |
chr15:71 769 394 | 125 | Retroposon (SVA_F) | 1 |
chr15:72 347 195 | 320 | SINE (AluYa5) | 1 |
chr15:73 690 968 | 321 | SINE (AluY) | 1 |
chr15:75 481 594 | 399 | Retroposon (SVA_F) | 1 |
chr15:76 230 513 | 78 | SINE (Alu) | 1 |
chr15:80 355 807 | 93 | SINE (AluSp) | 1 |
chr15:88 552 506 | 147 | Retroposon (SVA_E) | 1 |
chr15:94 276 660 | 305 | SINE (AluYa5) | 1 |
chr15:97 226 987 | 323 | SINE (AluYa5) | 1 |
chr15:97 280 914 | 328 | SINE (AluYa5) | 1 |
chr15:100 270 770 | 307 | SINE (AluY) | 1 |
chr15:100 272 598 | 324 | SINE (AluYa5) | 1 |
chr16:7 491 379 | 308 | SINE (AluYd8) | 1 |
chr16:11 940 569 | 35 | SINE (AluSg4) | 1 |
chr16:14 405 442 | 323 | SINE (AluYa5) | 1 |
chr16:23 853 965 | 325 | SINE (AluY) | 1 |
chr16:36 260 383 | 242 | LINE (L1HS) | 1 |
chr16:50 358 351 | 28 | SINE (AluJb) | 1 |
chr16:69 738 409 | 98 | SINE (AluSc8) | 1 |
chr16:69 820 416 | 53 | SINE (AluSg) | 1 |
chr16:75 574 801 | 43 | SINE (AluYh3) | 1 |
chr16:82 794 349 | 297 | SINE (AluY) | 1 |
chr16:86 278 757 | 176 | LTR (HERVH-int) | 1 |
chr16:87 158 054 | 318 | SINE (AluYa5) | 1 |
chr16:89 224 969 | 321 | SINE (AluY) | 1 |
chr16:89 617 674 | 306 | SINE (AluY) | 1 |
chr17:572 389 | 96 | Retroposon (SVA_F) | 1 |
chr17:1 276 784 | 435 | SINE (AluSx) | 1 |
chr17:3 544 256 | 265 | SINE (AluSx) | 1 |
chr17:4 274 926 | 27 | SINE (Alu) | 1 |
chr17:5 069 184 | 324 | SINE (AluSx) | 1 |
chr17:11 972 698 | 59 | LTR (HERVH-int) | 1 |
chr17:16 095 665 | 101 | Retroposon (SVA_F) | 1 |
chr17:16 699 504 | 133 | SINE (AluYk2) | 1 |
chr17:20 638 094 | 192 | SINE (AluSx) | 1 |
chr17:28 604 080 | 96 | Retroposon (SVA_F) | 1 |
chr17:31 515 455 | 317 | SINE (AluYa5) | 1 |
chr17:31 675 941 | 65 | LTR (LTR12) | 1 |
chr17:32 566 829 | 309 | SINE (AluYg6) | 1 |
chr17:38 631 702 | 127 | Retroposon (SVA_A) | 1 |
chr17:38 930 799 | 98 | Retroposon (SVA_F) | 1 |
chr17:46 210 498 | 68 | LINE (CR1_Mam) | 1 |
chr17:50 921 060 | 313 | SINE (AluYb8) | 1 |
chr17:52 953 842 | 311 | SINE (AluYa5) | 1 |
chr17:56 870 207 | 295 | SINE (AluYh7) | 1 |
chr17:65 937 259 | 37 | Retroposon (SVA_C) | 1 |
chr17:72 701 861 | 139 | SINE (AluJb) | 1 |
chr17:74 624 066 | 307 | SINE (AluYg6) | 1 |
chr17:75 194 906 | 333 | SINE (AluYb8) | 1 |
chr17:75 298 385 | 137 | SINE (AluSx3) | 1 |
chr17:81 146 946 | 326 | SINE (AluYb8) | 1 |
chr18:1 235 775 | 322 | SINE (AluY) | 1 |
chr18:9 058 019 | 276 | LTR (LTR45B) | 1 |
chr18:12 980 704 | 48 | Retroposon (SVA_F) | 1 |
chr18:14 860 387 | 350 | Retroposon (SVA_A) | 1 |
chr18:15 779 866 | 213 | LINE (L1P1) | 1 |
chr18:23 038 123 | 36 | LTR (LTR3B_v) | 1 |
chr18:26 214 250 | 153 | SINE (AluYa5) | 1 |
chr18:29 576 389 | 318 | SINE (AluYb8) | 1 |
chr18:30 220 881 | 320 | SINE (AluY) | 1 |
chr18:38 932 567 | 317 | SINE (AluYa5) | 1 |
chr18:40 768 188 | 315 | SINE (AluY) | 1 |
chr18:45 703 610 | 31 | LTR (MST-int) | 1 |
chr18:46 190 419 | 32 | SINE (Alu) | 1 |
chr18:49 621 064 | 243 | SINE (AluSx) | 1 |
chr18:49 799 841 | 36 | Retroposon (SVA_D) | 1 |
chr18:53 460 168 | 320 | SINE (AluYb8) | 1 |
chr18:65 820 032 | 316 | SINE (AluY) | 1 |
chr18:68 731 923 | 314 | SINE (AluYk2) | 1 |
chr18:68 905 254 | 332 | SINE (AluYb8) | 1 |
chr18:76 241 967 | 322 | SINE (AluYi6_4d) | 1 |
chr18:77 248 110 | 472 | LINE (L1HS) | 1 |
chr18:78 280 929 | 132 | LINE (L1P4) | 1 |
chr19:2 559 735 | 124 | SINE (AluJb) | 1 |
chr19:3 168 985 | 133 | SINE (AluSx) | 1 |
chr19:4 965 572 | 165 | SINE (AluJb) | 1 |
chr19:5 761 462 | 154 | LTR (MSTA) | 1 |
chr19:7 102 802 | 170 | SINE (AluSx) | 1 |
chr19:7 739 124 | 314 | SINE (AluYb8) | 1 |
chr19:10 715 006 | 135 | SINE (AluSz) | 1 |
chr19:14 934 350 | 310 | SINE (AluYa5) | 1 |
chr19:17 918 457 | 47 | Retroposon (SVA_F) | 1 |
chr19:20 858 628 | 38 | LTR (HERVIP10FH-int) | 1 |
chr19:21 669 142 | 37 | LTR (HERVK9-int) | 1 |
chr19:23 734 249 | 313 | SINE (AluYb8) | 1 |
chr19:23 768 604 | 313 | SINE (AluYa5) | 1 |
chr19:31 199 763 | 352 | SINE (AluYb8) | 1 |
chr19:46 509 014 | 307 | SINE (AluY) | 1 |
chr19:47 926 362 | 316 | LINE (L1PREC2) | 1 |
chr19:50 585 457 | 101 | SINE (AluJb) | 1 |
chr19:56 512 195 | 325 | SINE (AluYa5) | 1 |
chr19:57 483 254 | 39 | Retroposon (SVA_D) | 1 |
chr20:306 267 | 174 | SINE (AluJb) | 1 |
chr20:1 602 896 | 183 | LTR (HERV16-int) | 1 |
chr20:6 665 191 | 64 | DNA (MER33) | 1 |
chr20:8 689 955 | 303 | SINE (AluYd8) | 1 |
chr20:16 134 623 | 36 | LTR (MER41A) | 1 |
chr20:16 894 383 | 337 | SINE (AluY) | 1 |
chr20:18 689 890 | 175 | SINE (AluJb) | 1 |
chr20:23 765 577 | 78 | LINE (L1PA15-16) | 1 |
chr20:28 790 008 | 45 | LINE (L1P1) | 1 |
chr20:29 307 454 | 180 | SINE (AluSq) | 1 |
chr20:29 316 549 | 128 | LTR (LTR5A) | 1 |
chr20:29 802 581 | 811 | LTR (PRIMA41-int) | 1 |
chr20:35 564 371 | 148 | SINE (AluSg) | 1 |
chr20:44 297 116 | 37 | SINE (AluSp) | 1 |
chr20:53 657 126 | 321 | SINE (AluYb8) | 1 |
chr20:55 145 300 | 312 | SINE (AluYa5) | 1 |
chr20:60 439 013 | 75 | LINE (L1MD) | 1 |
chr20:60 600 152 | 75 | LTR (MSTB) | 1 |
chr20:61 142 534 | 317 | SINE (AluYa5) | 1 |
chr21:5 216 449 | 222 | LINE (L1M2) | 1 |
chr21:7 101 127 | 296 | LTR (LTR43-int) | 1 |
chr21:7 655 493 | 298 | LTR (LTR43-int) | 1 |
chr21:10 508 068 | 56 | LINE (L1M3) | 1 |
chr21:13 412 981 | 320 | SINE (AluYa5) | 1 |
chr21:20 142 805 | 314 | SINE (AluY) | 1 |
chr21:22 445 024 | 336 | SINE (AluYb8) | 1 |
chr21:24 981 909 | 326 | SINE (AluY) | 1 |
chr21:32 482 930 | 67 | SINE (AluJb) | 1 |
chr21:34 011 406 | 312 | SINE (AluYa5) | 1 |
chr21:35 865 628 | 327 | SINE (AluYa5) | 1 |
chr21:37 685 537 | 314 | SINE (AluYa5) | 1 |
chr21:42 965 782 | 320 | SINE (AluYb8) | 1 |
chr21:44 468 497 | 134 | SINE (AluSz) | 1 |
chr21:44 825 068 | 127 | Retroposon (SVA_F) | 1 |
chr22:11 860 399 | 308 | SINE (AluYa5) | 1 |
chr22:15 830 535 | 135 | SINE (AluSx) | 1 |
chr22:17 224 399 | 326 | SINE (AluYb8) | 1 |
chr22:18 106 942 | 189 | LTR (MLT2B4) | 1 |
chr22:19 373 921 | 127 | SINE (AluYa5) | 1 |
chr22:22 179 734 | 314 | SINE (AluYa5) | 1 |
chr22:30 597 422 | 159 | LTR (LTR12C) | 1 |
chr22:32 503 806 | 40 | LTR (HERVH-int) | 1 |
chr22:34 034 608 | 326 | SINE (AluY) | 1 |
chr22:34 363 016 | 63 | SINE (AluYh7) | 1 |
chr22:37 786 943 | 124 | Retroposon (SVA_F) | 1 |
chr22:40 745 099 | 174 | Retroposon (SVA_A) | 1 |
chr22:40 745 439 | 121 | Retroposon (SVA_F) | 1 |
chr22:41 294 868 | 383 | Retroposon (SVA_F) | 1 |
chr22:41 552 575 | 39 | SINE (AluJb) | 1 |
chr22:46 509 527 | 44 | DNA (MER20) | 1 |
chr22:49 879 747 | 216 | SINE (AluY) | 1 |
chrX:1 057 569 | 80 | SINE (AluSg) | 1 |
chrX:3 600 520 | 39 | LINE (L1MB1) | 1 |
chrX:8 978 447 | 89 | LINE (L1P4) | 1 |
chrX:24 709 090 | 129 | Retroposon (SVA_F) | 1 |
chrX:30 602 396 | 47 | Retroposon (SVA_F) | 1 |
chrX:31 982 954 | 315 | SINE (AluY) | 1 |
chrX:35 009 970 | 323 | SINE (AluYi6) | 1 |
chrX:40 211 109 | 336 | Retroposon (SVA_E) | 1 |
chrX:42 285 662 | 395 | Retroposon (SVA_E) | 1 |
chrX:45 040 275 | 164 | Retroposon (SVA_F) | 1 |
chrX:52 729 421 | 97 | LINE (L1PA4) | 1 |
chrX:53 772 507 | 127 | Retroposon (SVA_F) | 1 |
chrX:57 011 656 | 309 | LINE (L1P2) | 1 |
chrX:57 012 423 | 122 | LINE (L1P1) | 1 |
chrX:70 350 008 | 115 | Retroposon (SVA_D) | 1 |
chrX:72 681 896 | 227 | Retroposon (SVA_F) | 1 |
chrX:77 354 182 | 319 | SINE (AluYa5) | 1 |
chrX:78 265 511 | 175 | Retroposon (SVA_F) | 1 |
chrX:79 301 630 | 66 | LTR (MER50B) | 1 |
chrX:80 215 124 | 116 | Retroposon (SVA_A) | 1 |
chrX:84 754 818 | 120 | LINE (L1MC) | 1 |
chrX:86 872 340 | 116 | LTR (HERVL-int) | 1 |
chrX:89 128 145 | 264 | LINE (L1PA12) | 1 |
chrX:107 501 516 | 133 | SINE (AluYb8) | 1 |
chrX:115 347 266 | 43 | Retroposon (SVA_F) | 1 |
chrX:115 436 029 | 295 | SINE (AluY) | 1 |
chrX:117 704 886 | 329 | SINE (AluY) | 1 |
chrX:124 128 744 | 223 | Retroposon (SVA_F) | 1 |
chrX:131 467 165 | 77 | LINE (L1PA5) | 1 |
chrX:137 267 661 | 335 | SINE (AluY) | 1 |
chrY:56 867 596 | 132 | SINE (AluSc) | 1 |
Allele frequency is shown for insertions for each chromosome. Each dot marks a different insertion.
This is the classification of TEs by class (I or II), family (e.g., SINE), subfamily (e.g., Alu) and name (e.g., AluY). SVA, Alu and L1 elements have their own table on the Class I section.
Repeat | Repeat | Unique | Total | Total |
|---|---|---|---|---|
DNA | hAT | 7 | 12 | 12 |
TcMar | 8 | 15 | 15 | |
LINE | CR1 | 2 | 4 | 4 |
L1 | 303 | 571 | 554 | |
L2 | 6 | 12 | 11 | |
LTR | ERV1 | 113 | 212 | 192 |
ERVK | 17 | 33 | 33 | |
ERVL | 35 | 67 | 65 | |
Retroposon | SVA | 444 | 826 | 735 |
SINE | Alu | 1 542 | 2 979 | 2 948 |
MIR | 2 | 4 | 4 | |
Total | - | 2 479 | 4 735 | 4 573 |
Name | Unique | Total | Total |
|---|---|---|---|
SVA A | 58 | 108 | 96 |
SVA B | 12 | 23 | 23 |
SVA C | 11 | 22 | 19 |
SVA D | 14 | 26 | 23 |
SVA E | 70 | 128 | 116 |
SVA F | 273 | 507 | 446 |
SVA F1 | 6 | 12 | 12 |
Total | 444 | 826 | 735 |
Name | Unique | Total | Total |
|---|---|---|---|
Alu | 10 | 18 | 17 |
AluJb | 32 | 63 | 62 |
AluJo | 1 | 2 | 2 |
AluJr4 | 3 | 6 | 4 |
AluSc | 6 | 11 | 11 |
AluSc8 | 4 | 7 | 7 |
AluSg | 14 | 28 | 25 |
AluSg4 | 3 | 6 | 6 |
AluSg7 | 2 | 4 | 4 |
AluSp | 7 | 13 | 13 |
AluSq | 9 | 16 | 15 |
AluSq2 | 5 | 9 | 8 |
AluSx | 72 | 133 | 124 |
AluSx1 | 3 | 5 | 3 |
AluSx3 | 4 | 8 | 8 |
AluSx4 | 4 | 8 | 7 |
AluSz | 8 | 16 | 15 |
AluSz6 | 6 | 12 | 11 |
AluY | 358 | 690 | 685 |
AluYa5 | 503 | 979 | 979 |
AluYa8 | 7 | 14 | 14 |
AluYb8 | 259 | 505 | 504 |
AluYb9 | 34 | 67 | 67 |
AluYc | 15 | 29 | 29 |
AluYd8 | 15 | 29 | 29 |
AluYe5 | 43 | 84 | 84 |
AluYe6 | 1 | 2 | 2 |
AluYg6 | 28 | 55 | 55 |
AluYh3 | 1 | 1 | 1 |
AluYh7 | 9 | 16 | 16 |
AluYi6 | 10 | 19 | 18 |
AluYi6 4d | 2 | 4 | 4 |
AluYj4 | 3 | 6 | 6 |
AluYk11 | 4 | 7 | 7 |
AluYk12 | 4 | 8 | 8 |
AluYk2 | 44 | 81 | 81 |
AluYk3 | 4 | 8 | 7 |
FLAM C | 3 | 6 | 6 |
FRAM | 2 | 4 | 4 |
Total | 1 542 | 2 979 | 2 948 |
Name | Unique | Total | Total |
|---|---|---|---|
HAL1M8 | 1 | 2 | 2 |
L1HS | 141 | 265 | 259 |
L1M1 | 9 | 17 | 17 |
L1M2 | 2 | 3 | 3 |
L1M3 | 6 | 12 | 11 |
L1M4 | 5 | 9 | 9 |
L1M5 | 4 | 8 | 8 |
L1MA5 | 1 | 2 | 2 |
L1MA6 | 1 | 2 | 1 |
L1MA7 | 1 | 2 | 2 |
L1MB2 | 1 | 2 | 2 |
L1MB5 | 1 | 2 | 2 |
L1MB8 | 2 | 3 | 3 |
L1MC | 3 | 6 | 6 |
L1MC3 | 4 | 7 | 7 |
L1MC4 | 2 | 4 | 4 |
L1MC4a | 1 | 2 | 2 |
L1MC5 | 2 | 4 | 4 |
L1MCa | 1 | 2 | 2 |
L1MD | 1 | 2 | 1 |
L1MD3 | 2 | 4 | 4 |
L1ME1 | 1 | 2 | 2 |
L1MEc | 1 | 2 | 2 |
L1MEg | 1 | 2 | 2 |
L1P1 | 26 | 48 | 45 |
L1P2 | 7 | 12 | 12 |
L1P3 | 11 | 21 | 19 |
L1P3b | 1 | 2 | 2 |
L1P4 | 5 | 10 | 9 |
L1P5 | 5 | 10 | 10 |
L1PA10 | 3 | 6 | 6 |
L1PA12 | 1 | 2 | 2 |
L1PA13 | 3 | 6 | 6 |
L1PA15-16 | 2 | 3 | 3 |
L1PA16 | 2 | 4 | 4 |
L1PA17 | 1 | 2 | 2 |
L1PA2 | 10 | 18 | 18 |
L1PA3 | 4 | 8 | 8 |
L1PA4 | 3 | 6 | 6 |
L1PA5 | 1 | 2 | 2 |
L1PA6 | 2 | 4 | 4 |
L1PA7 | 3 | 6 | 6 |
L1PA8A | 3 | 5 | 5 |
L1PB | 3 | 5 | 5 |
L1PB1 | 1 | 2 | 2 |
L1PBa | 3 | 5 | 5 |
L1PBa1 | 2 | 4 | 3 |
L1PBb | 1 | 2 | 2 |
L1PREC2 | 6 | 12 | 11 |
Total | 303 | 571 | 554 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
chr1:1 477 853 | 132 | SINE (Alu) | ATAD3B | Promoter | 2 |
chr1:1 477 853 | 132 | SINE (Alu) | ATAD3B | Intron | 2 |
chr1:1 993 704 | 146 | SINE (Alu) | CFAP74 | Intron | 2 |
chr1:5 874 227 | 282 | SINE (Alu) | NPHP4 | Promoter | 2 |
chr1:5 874 227 | 282 | SINE (Alu) | NPHP4 | Intron | 2 |
chr1:7 018 127 | 183 | SINE (Alu) | CAMTA1 | Intron | 2 |
chr1:7 114 744 | 248 | LTR (ERVL) | CAMTA1 | Intron | 1 |
chr1:8 386 567 | 310 | SINE (Alu) | RERE | Intron | 2 |
chr1:8 441 929 | 316 | SINE (Alu) | RERE | Intron | 2 |
chr1:8 501 699 | 271 | Retroposon (SVA) | RERE | Intron | 1 |
chr1:8 502 128 | 361 | Retroposon (SVA) | RERE | Intron | 2 |
chr1:9 968 550 | 140 | SINE (Alu) | NMNAT1 | Intron | 2 |
chr1:16 311 086 | 147 | SINE (Alu) | FBXO42 | Intron | 1 |
chr1:16 424 204 | 134 | SINE (Alu) | SPATA21 | Intron | 2 |
chr1:16 868 225 | 317 | SINE (Alu) | CROCC | Intron | 2 |
chr1:21 166 095 | 316 | SINE (Alu) | EIF4G3 | Intron | 2 |
chr1:24 634 836 | 313 | SINE (Alu) | SRRM1 | Intron | 2 |
chr1:28 395 817 | 314 | SINE (Alu) | PHACTR4 | Intron | 2 |
chr1:28 410 087 | 124 | SINE (Alu) | PHACTR4 | Intron | 2 |
chr1:28 419 029 | 318 | SINE (Alu) | PHACTR4 | Intron | 2 |
chr1:28 571 781 | 333 | SINE (Alu) | TRNAU1AP | Intron | 1 |
chr1:28 994 949 | 307 | SINE (Alu) | EPB41 | Intron | 2 |
chr1:29 100 312 | 324 | SINE (Alu) | EPB41 | Intron | 2 |
chr1:33 052 498 | 50 | Retroposon (SVA) | AK2 | Intron | 1 |
chr1:33 052 506 | 100 | Retroposon (SVA) | AK2 | Intron | 1 |
chr1:37 967 098 | 315 | SINE (Alu) | SF3A3 | Intron | 2 |
chr1:38 485 066 | 75 | SINE (Alu) | LINC01685 | Intron | 2 |
chr1:39 234 633 | 515 | Retroposon (SVA) | MACF1 | Intron | 2 |
chr1:44 876 571 | 388 | Retroposon (SVA) | EIF2B3 | Promoter | 2 |
chr1:44 876 571 | 388 | Retroposon (SVA) | EIF2B3 | Intron | 2 |
chr1:45 330 021 | 325 | SINE (Alu) | MUTYH | Intron | 2 |
chr1:45 497 645 | 691 | Retroposon (SVA) | CCDC163 | Intron | 1 |
chr1:45 711 040 | 100 | LINE (L1) | IPP | Intron | 2 |
chr1:46 213 358 | 333 | SINE (Alu) | LURAP1 | Intron | 2 |
chr1:51 513 880 | 324 | SINE (Alu) | EPS15 | Intron | 2 |
chr1:51 711 458 | 354 | Retroposon (SVA) | OSBPL9 | Intron | 2 |
chr1:52 869 962 | 97 | Retroposon (SVA) | ZYG11A | Intron | 2 |
chr1:54 561 777 | 177 | Retroposon (SVA) | ACOT11 | Intron | 2 |
chr1:58 739 632 | 306 | SINE (Alu) | LOC112268263 | Intron | 2 |
chr1:59 406 189 | 318 | SINE (Alu) | FGGY | Intron | 2 |
chr1:63 473 989 | 117 | Retroposon (SVA) | ITGB3BP | Intron | 2 |
chr1:64 492 377 | 346 | SINE (Alu) | CACHD1 | Intron | 2 |
chr1:64 881 261 | 331 | SINE (Alu) | JAK1 | Intron | 2 |
chr1:69 595 971 | 318 | SINE (Alu) | LRRC7 | Intron | 2 |
chr1:74 727 204 | 3 706 | LINE (L1) | CRYZ | Intron | 2 |
chr1:79 116 389 | 306 | SINE (Alu) | ADGRL4 | Intron | 2 |
chr1:81 846 355 | 323 | SINE (Alu) | ADGRL2 | Intron | 2 |
chr1:88 650 033 | 313 | SINE (Alu) | PKN2-AS1 | Intron | 2 |
chr1:89 905 000 | 268 | SINE (Alu) | LRRC8D | Intron | 2 |
chr1:92 701 961 | 323 | SINE (Alu) | EVI5 | Intron | 2 |
chr1:94 877 128 | 303 | SINE (Alu) | SLC44A3 | Intron | 2 |
chr1:97 252 071 | 326 | SINE (Alu) | DPYD-AS1 | Intron | 2 |
chr1:107 599 843 | 308 | SINE (Alu) | VAV3 | Intron | 2 |
chr1:109 177 344 | 78 | Retroposon (SVA) | ELAPOR1 | Intron | 2 |
chr1:111 581 052 | 319 | SINE (Alu) | RAP1A | Intron | 2 |
chr1:112 449 371 | 315 | SINE (Alu) | CTTNBP2NL | Intron | 2 |
chr1:114 658 770 | 303 | SINE (Alu) | DENND2C | Intron | 2 |
chr1:117 430 024 | 175 | Retroposon (SVA) | MAN1A2 | Intron | 2 |
chr1:120 459 000 | 321 | SINE (Alu) | NBPF8 | Intron | 2 |
chr1:147 186 625 | 315 | SINE (Alu) | CHD1L | Intron | 2 |
chr1:147 191 656 | 173 | LINE (L1) | CHD1L | Intron | 2 |
chr1:147 949 446 | 118 | Retroposon (SVA) | GPR89B | Intron | 2 |
chr1:150 227 792 | 291 | SINE (Alu) | ANP32E | Intron | 2 |
chr1:151 769 284 | 91 | Retroposon (SVA) | OAZ3 | Intron | 2 |
chr1:155 700 905 | 348 | Retroposon (SVA) | DAP3 | Intron | 2 |
chr1:155 954 591 | 319 | SINE (Alu) | ARHGEF2 | Intron | 2 |
chr1:156 328 044 | 143 | Retroposon (SVA) | CCT3 | Intron | 1 |
chr1:161 868 759 | 329 | SINE (Alu) | ATF6 | Intron | 2 |
chr1:162 791 517 | 316 | SINE (Alu) | HSD17B7 | Intron | 2 |
chr1:162 868 630 | 111 | LINE (L1) | CCDC190 | Intron | 1 |
chr1:165 690 066 | 272 | SINE (Alu) | ALDH9A1 | Intron | 2 |
chr1:167 889 444 | 286 | SINE (Alu) | ADCY10 | Intron | 2 |
chr1:169 256 811 | 126 | LINE (L1) | ATP1B1 | Intron | 1 |
chr1:169 993 600 | 163 | SINE (Alu) | KIFAP3 | Intron | 2 |
chr1:172 571 921 | 393 | Retroposon (SVA) | SUCO | Intron | 2 |
chr1:185 615 653 | 316 | SINE (Alu) | LINC01350 | Intron | 2 |
chr1:192 857 349 | 78 | Retroposon (SVA) | LOC105371665 | Intron | 1 |
chr1:192 857 702 | 174 | Retroposon (SVA) | LOC105371665 | Intron | 2 |
chr1:204 375 911 | 325 | SINE (Alu) | PLEKHA6 | Intron | 1 |
chr1:210 731 511 | 334 | SINE (Alu) | KCNH1 | Intron | 2 |
chr1:210 745 033 | 121 | SINE (Alu) | KCNH1 | Intron | 2 |
chr1:212 592 494 | 316 | SINE (Alu) | ATF3 | Intron | 2 |
chr1:217 740 158 | 328 | SINE (Alu) | SPATA17 | Intron | 2 |
chr1:220 781 002 | 317 | SINE (Alu) | MTARC2 | Intron | 2 |
chr1:222 697 340 | 331 | SINE (Alu) | AIDA | Intron | 2 |
chr1:223 723 854 | 328 | SINE (Alu) | CAPN2 | Intron | 2 |
chr1:224 121 536 | 85 | SINE (Alu) | FBXO28 | Intron | 2 |
chr1:227 275 238 | 323 | SINE (Alu) | CDC42BPA | Intron | 2 |
chr1:227 314 752 | 142 | SINE (Alu) | CDC42BPA | Intron | 2 |
chr1:227 414 560 | 314 | SINE (Alu) | LINC01641 | Intron | 2 |
chr1:230 949 403 | 303 | SINE (Alu) | TTC13 | Intron | 2 |
chr1:234 669 965 | 321 | SINE (Alu) | LOC105373209 | Intron | 2 |
chr1:235 309 369 | 85 | Retroposon (SVA) | ARID4B | Intron | 2 |
chr1:235 635 571 | 167 | LTR (ERVL) | GNG4 | Intron | 2 |
chr1:236 374 897 | 2 096 | Retroposon (SVA) | EDARADD | Intron | 2 |
chr1:236 387 105 | 225 | Retroposon (SVA) | EDARADD | Intron | 2 |
chr1:237 405 893 | 313 | SINE (Alu) | RYR2 | Intron | 2 |
chr1:237 804 310 | 307 | SINE (Alu) | RYR2 | Intron | 2 |
chr1:241 067 885 | 330 | SINE (Alu) | RGS7 | Intron | 2 |
chr1:243 166 576 | 317 | SINE (Alu) | CEP170 | Promoter | 2 |
chr1:243 166 576 | 317 | SINE (Alu) | CEP170 | Intron | 2 |
chr1:245 826 009 | 321 | SINE (Alu) | SMYD3 | Intron | 2 |
chr1:246 363 230 | 137 | Retroposon (SVA) | SMYD3 | Intron | 2 |
chr1:246 402 366 | 168 | SINE (Alu) | SMYD3 | Intron | 2 |
chr1:246 652 865 | 265 | SINE (Alu) | CNST | Intron | 2 |
chr1:248 911 726 | 126 | Retroposon (SVA) | PGBD2 | Intron | 2 |
chr1:710 578 | 317 | SINE (Alu) | OR4F16 | Intron | 2 |
chr1:748 213 | 327 | SINE (Alu) | LOC105378947 | Intron | 2 |
chr2:1 143 706 | 278 | SINE (Alu) | SNTG2 | Intron | 2 |
chr2:1 467 941 | 328 | SINE (Alu) | TPO | Intron | 2 |
chr2:2 295 566 | 1 286 | LTR (ERV1) | MYT1L | Intron | 1 |
chr2:2 295 585 | 162 | LTR (ERV1) | MYT1L | Intron | 2 |
chr2:3 670 864 | 313 | SINE (Alu) | ALLC | Intron | 2 |
chr2:11 213 564 | 311 | SINE (Alu) | ROCK2 | Intron | 2 |
chr2:11 286 232 | 325 | SINE (Alu) | ROCK2 | Intron | 2 |
chr2:15 379 414 | 312 | SINE (Alu) | NBAS | Intron | 2 |
chr2:15 541 820 | 154 | Retroposon (SVA) | NBAS | Intron | 1 |
chr2:15 611 910 | 96 | Retroposon (SVA) | DDX1 | Intron | 2 |
chr2:21 573 937 | 296 | SINE (Alu) | LOC105374320 | Intron | 2 |
chr2:24 255 683 | 122 | SINE (Alu) | ITSN2 | Intron | 2 |
chr2:26 251 065 | 329 | SINE (Alu) | HADHB | Intron | 2 |
chr2:27 539 849 | 492 | Retroposon (SVA) | C2orf16 | Intron | 2 |
chr2:27 539 883 | 126 | Retroposon (SVA) | C2orf16 | Intron | 2 |
chr2:29 583 550 | 318 | SINE (Alu) | ALK | Intron | 2 |
chr2:31 336 819 | 317 | SINE (Alu) | XDH | Intron | 2 |
chr2:34 030 310 | 316 | SINE (Alu) | LINC01317 | Intron | 2 |
chr2:36 777 087 | 306 | SINE (Alu) | VIT | Intron | 2 |
chr2:39 079 153 | 61 | LINE (L1) | SOS1 | Intron | 2 |
chr2:39 088 182 | 315 | SINE (Alu) | SOS1 | Intron | 2 |
chr2:40 386 532 | 331 | SINE (Alu) | SLC8A1 | Intron | 2 |
chr2:43 297 713 | 146 | Retroposon (SVA) | THADA | Intron | 2 |
chr2:43 298 038 | 713 | Retroposon (SVA) | THADA | Intron | 2 |
chr2:44 588 991 | 260 | Retroposon (SVA) | CAMKMT | Intron | 2 |
chr2:44 598 695 | 316 | SINE (Alu) | CAMKMT | Intron | 2 |
chr2:45 969 044 | 329 | SINE (Alu) | PRKCE | Intron | 2 |
chr2:46 701 810 | 291 | SINE (Alu) | LINC01118 | Intron | 2 |
chr2:47 092 140 | 330 | SINE (Alu) | STPG4 | Intron | 2 |
chr2:48 555 845 | 77 | Retroposon (SVA) | STON1 | Intron | 2 |
chr2:50 375 489 | 327 | SINE (Alu) | NRXN1 | Intron | 2 |
chr2:50 989 024 | 333 | SINE (Alu) | NRXN1 | Intron | 2 |
chr2:51 242 085 | 297 | SINE (Alu) | LOC730100 | Intron | 2 |
chr2:51 894 156 | 2 225 | LINE (L1) | LOC730100 | Intron | 2 |
chr2:54 097 908 | 323 | SINE (Alu) | ACYP2 | Intron | 2 |
chr2:56 146 383 | 317 | SINE (Alu) | LOC105374690 | Intron | 2 |
chr2:59 647 122 | 241 | SINE (Alu) | LOC105374754 | Intron | 2 |
chr2:60 418 637 | 62 | LTR (ERV1) | MIR4432HG | Intron | 1 |
chr2:63 552 086 | 325 | SINE (Alu) | WDPCP | Intron | 2 |
chr2:63 722 521 | 321 | Retroposon (SVA) | WDPCP | Intron | 1 |
chr2:64 936 632 | 330 | SINE (Alu) | LINC02245 | Intron | 2 |
chr2:65 106 650 | 305 | SINE (Alu) | RAB1A | Intron | 2 |
chr2:65 526 899 | 226 | SINE (Alu) | LINC02934 | Intron | 2 |
chr2:65 600 607 | 1 236 | Retroposon (SVA) | LINC02934 | Intron | 1 |
chr2:65 600 653 | 435 | Retroposon (SVA) | LINC02934 | Intron | 1 |
chr2:65 600 945 | 98 | Retroposon (SVA) | LINC02934 | Intron | 1 |
chr2:66 431 844 | 306 | SINE (Alu) | MEIS1-AS3 | Intron | 2 |
chr2:69 517 524 | 322 | SINE (Alu) | AAK1 | Intron | 2 |
chr2:72 240 398 | 6 061 | LINE (L1) | EXOC6B | Intron | 2 |
chr2:73 898 352 | 319 | SINE (Alu) | ACTG2 | Intron | 2 |
chr2:75 160 774 | 315 | SINE (Alu) | LOC105374811 | Intron | 2 |
chr2:77 089 238 | 60 | LTR (ERV1) | LRRTM4 | Intron | 1 |
chr2:77 089 238 | 60 | LTR (ERV1) | LRRTM4 | Intron | 1 |
chr2:87 180 576 | 494 | LINE (L1) | LOC102724642 | Intron | 2 |
chr2:99 820 750 | 331 | SINE (Alu) | AFF3 | Intron | 2 |
chr2:110 924 784 | 295 | SINE (Alu) | ACOXL | Intron | 2 |
chr2:111 283 808 | 327 | SINE (Alu) | MIR4435-2HG | Intron | 2 |
chr2:111 689 844 | 331 | SINE (Alu) | MIR4435-2HG | Intron | 2 |
chr2:111 696 356 | 315 | SINE (Alu) | MIR4435-2HG | Intron | 2 |
chr2:113 348 854 | 319 | SINE (Alu) | LINC02966 | Intron | 2 |
chr2:113 395 042 | 129 | Retroposon (SVA) | LINC02966 | Intron | 1 |
chr2:115 076 289 | 316 | SINE (Alu) | DPP10 | Intron | 2 |
chr2:115 770 539 | 4 143 | LINE (L1) | DPP10 | Intron | 2 |
chr2:117 871 804 | 101 | LINE (L1) | LOC101929908 | Intron | 2 |
chr2:118 042 420 | 74 | LINE (L1) | LOC102723413 | Intron | 2 |
chr2:119 843 891 | 629 | Retroposon (SVA) | PTPN4 | Intron | 2 |
chr2:119 844 158 | 171 | Retroposon (SVA) | PTPN4 | Intron | 2 |
chr2:122 573 068 | 317 | SINE (Alu) | LOC105373595 | Intron | 2 |
chr2:127 981 354 | 120 | LTR (ERV1) | SAP130 | Intron | 2 |
chr2:128 298 068 | 288 | SINE (Alu) | HS6ST1 | Intron | 2 |
chr2:130 095 311 | 6 032 | LINE (L1) | POTEF | Intron | 1 |
chr2:133 158 922 | 325 | SINE (Alu) | NCKAP5 | Intron | 2 |
chr2:140 776 485 | 325 | SINE (Alu) | LRP1B | Intron | 2 |
chr2:141 567 781 | 316 | SINE (Alu) | LRP1B | Intron | 1 |
chr2:147 892 493 | 300 | SINE (Alu) | ACVR2A | Intron | 2 |
chr2:149 907 736 | 326 | SINE (Alu) | MMADHC-DT | Intron | 2 |
chr2:152 391 750 | 328 | SINE (Alu) | FMNL2 | Intron | 2 |
chr2:153 896 070 | 332 | SINE (Alu) | GALNT13 | Intron | 2 |
chr2:158 426 108 | 328 | SINE (Alu) | CCDC148 | Intron | 2 |
chr2:159 519 808 | 159 | SINE (Alu) | BAZ2B | Intron | 2 |
chr2:168 615 537 | 328 | SINE (Alu) | CERS6 | Intron | 2 |
chr2:169 179 811 | 313 | SINE (Alu) | LRP2 | Intron | 2 |
chr2:171 866 625 | 418 | Retroposon (SVA) | SLC25A12 | Intron | 1 |
chr2:172 451 993 | 314 | SINE (Alu) | ITGA6 | Intron | 2 |
chr2:174 871 203 | 318 | SINE (Alu) | CHN1 | Intron | 2 |
chr2:177 453 984 | 334 | SINE (Alu) | AGPS | Intron | 1 |
chr2:177 486 725 | 339 | SINE (Alu) | AGPS | Intron | 2 |
chr2:177 784 215 | 311 | SINE (Alu) | PDE11A | Intron | 2 |
chr2:177 811 516 | 216 | LINE (L1) | PDE11A | Intron | 2 |
chr2:177 946 826 | 127 | Retroposon (SVA) | PDE11A | Intron | 1 |
chr2:184 896 828 | 324 | SINE (Alu) | ZNF804A | Intron | 1 |
chr2:186 344 254 | 319 | SINE (Alu) | LINC01473 | Intron | 2 |
chr2:189 094 694 | 311 | SINE (Alu) | COL5A2 | Intron | 2 |
chr2:191 922 179 | 157 | LTR (ERV1) | CAVIN2-AS1 | Promoter | 1 |
chr2:191 922 179 | 157 | LTR (ERV1) | CAVIN2-AS1 | Intron | 1 |
chr2:197 898 728 | 310 | SINE (Alu) | PLCL1 | Intron | 2 |
chr2:201 197 144 | 334 | SINE (Alu) | CASP10 | Intron | 2 |
chr2:201 766 721 | 320 | SINE (Alu) | ALS2 | Intron | 2 |
chr2:207 607 676 | 324 | SINE (Alu) | METTL21A | Intron | 2 |
chr2:211 843 606 | 315 | SINE (Alu) | ERBB4 | Intron | 2 |
chr2:211 981 038 | 258 | SINE (Alu) | ERBB4 | Intron | 2 |
chr2:212 060 586 | 327 | SINE (Alu) | ERBB4 | Intron | 2 |
chr2:214 336 906 | 324 | SINE (Alu) | SPAG16 | Intron | 2 |
chr2:214 835 366 | 420 | Retroposon (SVA) | SNHG31 | Intron | 2 |
chr2:217 316 033 | 316 | SINE (Alu) | DIRC3-AS1 | Intron | 1 |
chr2:217 348 920 | 307 | SINE (Alu) | DIRC3 | Intron | 2 |
chr2:218 476 405 | 296 | SINE (Alu) | USP37 | Intron | 2 |
chr2:227 158 760 | 328 | SINE (Alu) | COL4A4 | Intron | 2 |
chr2:230 937 441 | 217 | LTR (ERV1) | GPR55 | Intron | 2 |
chr2:232 246 906 | 128 | LINE (L1) | DIS3L2 | Intron | 2 |
chr2:232 981 165 | 311 | SINE (Alu) | NGEF | Intron | 2 |
chr2:233 724 140 | 50 | Retroposon (SVA) | UGT1A8 | Intron | 2 |
chr3:2 129 412 | 336 | SINE (Alu) | CNTN4 | Intron | 2 |
chr3:4 163 465 | 310 | SINE (Alu) | SUMF1 | Intron | 2 |
chr3:7 128 559 | 64 | SINE (Alu) | GRM7 | Intron | 2 |
chr3:7 572 894 | 308 | SINE (Alu) | GRM7 | Intron | 2 |
chr3:8 440 366 | 506 | Retroposon (SVA) | LOC101927394 | Intron | 1 |
chr3:10 070 475 | 212 | Retroposon (SVA) | FANCD2 | Intron | 2 |
chr3:11 162 490 | 314 | SINE (Alu) | HRH1 | Intron | 2 |
chr3:11 487 603 | 548 | Retroposon (SVA) | ATG7 | Intron | 2 |
chr3:12 095 549 | 323 | SINE (Alu) | SYN2 | Intron | 2 |
chr3:15 742 693 | 746 | Retroposon (SVA) | ANKRD28 | Intron | 2 |
chr3:16 980 118 | 94 | Retroposon (SVA) | PLCL2 | Intron | 1 |
chr3:16 980 137 | 779 | Retroposon (SVA) | PLCL2 | Intron | 2 |
chr3:17 776 004 | 79 | LTR (ERV1) | TBC1D5 | Intron | 2 |
chr3:25 348 406 | 317 | SINE (Alu) | RARB | Intron | 2 |
chr3:25 627 413 | 315 | SINE (Alu) | TOP2B | Promoter | 2 |
chr3:25 627 413 | 315 | SINE (Alu) | TOP2B | Intron | 2 |
chr3:28 798 671 | 327 | SINE (Alu) | ZCWPW2 | Intron | 2 |
chr3:29 180 681 | 334 | SINE (Alu) | ZCWPW2 | Intron | 2 |
chr3:29 198 390 | 325 | SINE (Alu) | ZCWPW2 | Intron | 2 |
chr3:31 839 889 | 327 | SINE (Alu) | OSBPL10 | Intron | 2 |
chr3:32 002 686 | 94 | LTR (ERV1) | OSBPL10 | Intron | 1 |
chr3:32 397 295 | 253 | SINE (Alu) | CMTM7 | Intron | 2 |
chr3:38 358 205 | 290 | SINE (Alu) | XYLB | Intron | 2 |
chr3:40 200 116 | 323 | SINE (Alu) | MYRIP | Intron | 2 |
chr3:45 501 159 | 316 | SINE (Alu) | LARS2 | Intron | 2 |
chr3:46 494 995 | 324 | Retroposon (SVA) | RTP3 | Intron | 1 |
chr3:46 495 059 | 324 | Retroposon (SVA) | RTP3 | Intron | 1 |
chr3:47 741 368 | 319 | SINE (Alu) | SMARCC1 | Intron | 2 |
chr3:48 708 596 | 325 | SINE (Alu) | IP6K2 | Intron | 2 |
chr3:49 913 639 | 324 | SINE (Alu) | MON1A | Intron | 2 |
chr3:50 025 592 | 266 | SINE (Alu) | RBM6 | Intron | 2 |
chr3:50 084 782 | 79 | Retroposon (SVA) | RBM6 | Intron | 1 |
chr3:50 084 928 | 175 | Retroposon (SVA) | RBM6 | Intron | 1 |
chr3:50 841 727 | 344 | SINE (Alu) | DOCK3 | Intron | 2 |
chr3:51 249 630 | 76 | Retroposon (SVA) | DOCK3 | Intron | 1 |
chr3:51 249 675 | 124 | Retroposon (SVA) | DOCK3 | Intron | 1 |
chr3:51 588 291 | 135 | SINE (Alu) | RAD54L2 | Intron | 1 |
chr3:53 465 971 | 338 | SINE (Alu) | CACNA1D | Intron | 2 |
chr3:56 584 258 | 79 | Retroposon (SVA) | CCDC66 | Intron | 2 |
chr3:57 448 751 | 485 | LTR (ERV1) | DNAH12 | Intron | 2 |
chr3:57 578 464 | 308 | SINE (Alu) | ARF4 | Intron | 2 |
chr3:59 908 834 | 113 | SINE (Alu) | FHIT | Intron | 2 |
chr3:61 671 741 | 177 | Retroposon (SVA) | PTPRG | Intron | 2 |
chr3:63 555 273 | 311 | SINE (Alu) | SYNPR | Intron | 2 |
chr3:76 936 718 | 306 | SINE (Alu) | ROBO2 | Intron | 2 |
chr3:78 809 656 | 88 | LINE (L1) | ROBO1 | Intron | 2 |
chr3:82 095 701 | 6 115 | LINE (L1) | LINC02008 | Intron | 2 |
chr3:85 527 417 | 6 049 | LINE (L1) | CADM2 | Intron | 2 |
chr3:88 428 991 | 292 | SINE (Alu) | CSNKA2IP | Intron | 2 |
chr3:89 257 672 | 322 | SINE (Alu) | EPHA3 | Intron | 2 |
chr3:98 836 802 | 77 | Retroposon (SVA) | DCBLD2 | Intron | 1 |
chr3:98 837 827 | 225 | Retroposon (SVA) | DCBLD2 | Intron | 1 |
chr3:99 007 919 | 311 | SINE (Alu) | LOC105374002 | Intron | 2 |
chr3:99 936 539 | 323 | SINE (Alu) | CMSS1 | Intron | 2 |
chr3:100 691 697 | 327 | SINE (Alu) | ADGRG7 | Intron | 1 |
chr3:101 440 005 | 858 | Retroposon (SVA) | SENP7 | Intron | 2 |
chr3:108 174 473 | 325 | SINE (Alu) | IFT57 | Intron | 2 |
chr3:111 507 517 | 327 | SINE (Alu) | LOC105374039 | Intron | 2 |
chr3:112 205 623 | 49 | LINE (L1) | SLC9C1 | Intron | 2 |
chr3:114 279 583 | 184 | SINE (Alu) | TIGIT | Intron | 2 |
chr3:114 646 076 | 320 | SINE (Alu) | ZBTB20 | Intron | 2 |
chr3:117 050 834 | 49 | Retroposon (SVA) | LSAMP | Intron | 1 |
chr3:118 453 220 | 326 | SINE (Alu) | LOC105374060 | Intron | 2 |
chr3:120 600 109 | 308 | SINE (Alu) | NDUFB4 | Promoter | 2 |
chr3:120 600 109 | 308 | SINE (Alu) | NDUFB4 | Intron | 2 |
chr3:122 747 707 | 174 | Retroposon (SVA) | HSPBAP1 | Intron | 1 |
chr3:123 871 864 | 6 041 | LINE (L1) | MYLK | Intron | 2 |
chr3:124 687 657 | 317 | SINE (Alu) | KALRN | Intron | 2 |
chr3:124 868 249 | 324 | SINE (Alu) | ITGB5 | Intron | 2 |
chr3:124 922 699 | 135 | SINE (Alu) | MUC13 | Intron | 2 |
chr3:125 910 277 | 54 | LTR (ERVL) | LOC102723696 | Promoter | 2 |
chr3:125 910 277 | 54 | LTR (ERVL) | LINC02614 | Intron | 2 |
chr3:128 954 788 | 53 | Retroposon (SVA) | CFAP92 | Intron | 2 |
chr3:130 219 573 | 317 | SINE (Alu) | COL6A4P2 | Intron | 2 |
chr3:132 470 610 | 406 | Retroposon (SVA) | DNAJC13 | Intron | 2 |
chr3:132 471 012 | 48 | Retroposon (SVA) | DNAJC13 | Intron | 1 |
chr3:136 893 195 | 107 | LINE (L1) | NCK1 | Intron | 2 |
chr3:143 047 267 | 176 | Retroposon (SVA) | U2SURP | Intron | 2 |
chr3:143 543 762 | 107 | SINE (Alu) | SLC9A9 | Intron | 2 |
chr3:149 380 189 | 690 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 1 |
chr3:149 380 284 | 626 | Retroposon (SVA) | TM4SF1-AS1 | Intron | 1 |
chr3:151 430 755 | 6 046 | LINE (L1) | MED12L | Intron | 2 |
chr3:151 820 689 | 173 | SINE (Alu) | AADAC | Intron | 2 |
chr3:156 522 084 | 308 | SINE (Alu) | KCNAB1 | Intron | 2 |
chr3:157 178 598 | 73 | Retroposon (SVA) | LOC101928236 | Intron | 2 |
chr3:157 179 175 | 72 | Retroposon (SVA) | LOC101928236 | Intron | 1 |
chr3:174 037 905 | 688 | LINE (L1) | NLGN1 | Intron | 2 |
chr3:174 211 587 | 119 | LTR (ERV1) | NLGN1 | Intron | 1 |
chr3:174 211 749 | 118 | LTR (ERV1) | NLGN1 | Intron | 1 |
chr3:174 692 945 | 322 | SINE (Alu) | NAALADL2 | Intron | 2 |
chr3:174 796 725 | 243 | LINE (L1) | NAALADL2 | Intron | 2 |
chr3:177 457 374 | 86 | LTR (ERV1) | LINC00578 | Intron | 1 |
chr3:178 393 247 | 329 | SINE (Alu) | KCNMB2 | Intron | 2 |
chr3:179 121 485 | 67 | Retroposon (SVA) | PIK3CA-DT | Intron | 2 |
chr3:179 917 038 | 329 | SINE (Alu) | PEX5L-AS2 | Intron | 2 |
chr3:180 766 307 | 324 | SINE (Alu) | LOC101928882 | Intron | 2 |
chr3:181 475 037 | 3 196 | LINE (L1) | SOX2-OT | Intron | 2 |
chr3:186 654 333 | 6 023 | LINE (L1) | HRG-AS1 | Intron | 1 |
chr3:189 165 421 | 322 | SINE (Alu) | TPRG1 | Intron | 2 |
chr3:190 439 020 | 186 | SINE (Alu) | TMEM207 | Intron | 2 |
chr3:191 281 660 | 319 | SINE (Alu) | UTS2B | Intron | 2 |
chr3:191 390 410 | 77 | LTR (ERV1) | CCDC50 | Intron | 2 |
chr3:193 636 368 | 1 058 | LINE (L1) | OPA1 | Promoter | 2 |
chr3:193 636 368 | 1 058 | LINE (L1) | OPA1 | Intron | 2 |
chr3:194 498 483 | 2 623 | Retroposon (SVA) | ATP13A3 | Promoter | 2 |
chr3:194 498 483 | 2 623 | Retroposon (SVA) | ATP13A3-DT | Intron | 2 |
chr3:195 684 963 | 309 | SINE (Alu) | MIR570HG | Promoter | 2 |
chr3:195 684 963 | 309 | SINE (Alu) | SDHAP2 | Intron | 2 |
chr3:196 034 884 | 328 | SINE (Alu) | TFRC | Intron | 2 |
chr3:197 727 989 | 71 | SINE (Alu) | RUBCN | Intron | 2 |
chr4:1 308 027 | 316 | SINE (Alu) | MAEA | Intron | 2 |
chr4:1 319 645 | 132 | SINE (Alu) | MAEA | Intron | 2 |
chr4:4 349 001 | 65 | LTR (ERV1) | NSG1 | Intron | 2 |
chr4:6 977 627 | 79 | Retroposon (SVA) | TBC1D14 | Intron | 1 |
chr4:9 449 339 | 137 | LINE (L1) | DEFB131A | Intron | 2 |
chr4:10 631 053 | 6 024 | LINE (L1) | CLNK | Intron | 2 |
chr4:12 237 650 | 137 | SINE (Alu) | LINC02270 | Intron | 2 |
chr4:13 761 218 | 145 | Retroposon (SVA) | LOC107986182 | Intron | 2 |
chr4:14 847 399 | 5 463 | LINE (L1) | LINC00504 | Intron | 2 |
chr4:14 955 275 | 114 | LTR (ERVL) | CPEB2-DT | Intron | 2 |
chr4:15 615 472 | 237 | LTR (ERV1) | FBXL5 | Intron | 2 |
chr4:19 220 485 | 313 | SINE (Alu) | LINC02438 | Intron | 2 |
chr4:25 808 835 | 271 | SINE (Alu) | SEL1L3 | Intron | 1 |
chr4:25 808 843 | 135 | SINE (Alu) | SEL1L3 | Intron | 2 |
chr4:25 827 843 | 145 | SINE (Alu) | SEL1L3 | Intron | 2 |
chr4:26 484 865 | 281 | SINE (Alu) | CCKAR | Intron | 1 |
chr4:30 890 444 | 320 | SINE (Alu) | PCDH7 | Intron | 2 |
chr4:36 323 569 | 313 | SINE (Alu) | DTHD1 | Intron | 2 |
chr4:37 509 272 | 86 | Retroposon (SVA) | C4orf19 | Intron | 2 |
chr4:40 879 175 | 332 | SINE (Alu) | APBB2 | Intron | 2 |
chr4:41 229 957 | 338 | SINE (Alu) | UCHL1-DT | Intron | 2 |
chr4:41 918 795 | 309 | SINE (Alu) | LOC105374426 | Intron | 2 |
chr4:42 086 022 | 316 | SINE (Alu) | SLC30A9 | Intron | 2 |
chr4:46 378 044 | 301 | Retroposon (SVA) | GABRA2 | Intron | 1 |
chr4:47 005 771 | 426 | LINE (L1) | GABRB1 | Intron | 2 |
chr4:47 542 099 | 333 | SINE (Alu) | ATP10D | Intron | 2 |
chr4:52 081 949 | 147 | LINE (CR1) | SPATA18 | Intron | 2 |
chr4:52 737 160 | 171 | SINE (Alu) | RASL11B | Intron | 2 |
chr4:54 154 800 | 160 | LTR (ERV1) | PDGFRA | Intron | 1 |
chr4:55 505 777 | 320 | SINE (Alu) | CLOCK | Intron | 2 |
chr4:64 351 027 | 290 | SINE (Alu) | TECRL | Intron | 2 |
chr4:68 079 050 | 314 | SINE (Alu) | UBA6-DT | Intron | 2 |
chr4:69 762 350 | 173 | Retroposon (SVA) | SULT1B1 | Intron | 2 |
chr4:75 861 613 | 324 | SINE (Alu) | PPEF2 | Intron | 2 |
chr4:78 238 350 | 322 | SINE (Alu) | FRAS1 | Intron | 2 |
chr4:79 847 384 | 685 | LINE (L1) | PCAT4 | Intron | 2 |
chr4:81 708 982 | 319 | SINE (Alu) | RASGEF1B | Intron | 2 |
chr4:85 549 216 | 316 | SINE (Alu) | ARHGAP24 | Intron | 2 |
chr4:85 583 924 | 72 | LINE (L1) | ARHGAP24 | Intron | 2 |
chr4:85 663 335 | 319 | SINE (Alu) | ARHGAP24 | Intron | 2 |
chr4:89 042 100 | 216 | SINE (Alu) | FAM13A | Intron | 1 |
chr4:90 372 927 | 332 | SINE (Alu) | CCSER1 | Intron | 2 |
chr4:104 675 961 | 312 | SINE (Alu) | CXXC4-AS1 | Intron | 2 |
chr4:109 597 334 | 195 | Retroposon (SVA) | MCUB | Intron | 1 |
chr4:111 707 802 | 6 049 | LINE (L1) | LOC105377366 | Intron | 2 |
chr4:113 097 092 | 312 | SINE (Alu) | ANK2 | Intron | 2 |
chr4:114 628 766 | 317 | SINE (Alu) | UGT8 | Intron | 2 |
chr4:115 922 427 | 48 | LINE (L1) | LOC105377383 | Intron | 1 |
chr4:117 844 098 | 1 730 | LINE (L1) | LINC02264 | Intron | 2 |
chr4:122 875 426 | 277 | SINE (Alu) | FGF2 | Intron | 2 |
chr4:123 709 543 | 129 | LINE (L1) | LINC01091 | Intron | 2 |
chr4:127 682 038 | 310 | SINE (Alu) | INTU | Intron | 2 |
chr4:128 286 079 | 321 | SINE (Alu) | PGRMC2 | Intron | 2 |
chr4:134 214 179 | 411 | LTR (ERVL) | PABPC4L | Intron | 2 |
chr4:138 304 044 | 322 | SINE (Alu) | LINC00498 | Intron | 2 |
chr4:140 017 765 | 149 | SINE (Alu) | MAML3 | Intron | 2 |
chr4:142 337 146 | 312 | SINE (Alu) | INPP4B | Intron | 2 |
chr4:144 474 138 | 326 | SINE (Alu) | GYPA | Intron | 2 |
chr4:145 694 536 | 76 | Retroposon (SVA) | C4orf51 | Intron | 2 |
chr4:146 304 131 | 6 031 | LINE (L1) | SLC10A7 | Intron | 2 |
chr4:147 132 785 | 322 | SINE (Alu) | LOC105377476 | Intron | 2 |
chr4:150 372 751 | 324 | SINE (Alu) | LRBA | Intron | 2 |
chr4:150 660 232 | 97 | Retroposon (SVA) | LRBA | Intron | 2 |
chr4:150 953 970 | 79 | Retroposon (SVA) | LRBA | Intron | 2 |
chr4:151 214 784 | 126 | Retroposon (SVA) | SH3D19 | Intron | 1 |
chr4:151 526 492 | 48 | Retroposon (SVA) | FHIP1A | Intron | 1 |
chr4:152 955 | 3 374 | Retroposon (SVA) | ZNF718 | Intron | 2 |
chr4:153 267 093 | 319 | SINE (Alu) | TRIM2 | Intron | 2 |
chr4:153 979 895 | 324 | SINE (Alu) | LOC101927947 | Intron | 2 |
chr4:157 986 118 | 6 061 | LINE (L1) | LOC105377509 | Intron | 2 |
chr4:159 704 883 | 321 | SINE (Alu) | LINC02233 | Intron | 2 |
chr4:161 435 495 | 310 | SINE (Alu) | FSTL5 | Intron | 1 |
chr4:163 836 593 | 223 | SINE (Alu) | MARCHF1 | Intron | 2 |
chr4:163 881 679 | 309 | SINE (Alu) | MARCHF1 | Intron | 2 |
chr4:164 782 598 | 57 | SINE (Alu) | SMIM31 | Intron | 2 |
chr4:169 667 679 | 315 | SINE (Alu) | CLCN3 | Intron | 2 |
chr4:169 913 439 | 299 | SINE (Alu) | LOC105377530 | Intron | 1 |
chr4:173 123 062 | 319 | SINE (Alu) | GALNT7-DT | Intron | 2 |
chr4:173 228 289 | 317 | SINE (Alu) | GALNT7 | Intron | 2 |
chr4:174 290 427 | 311 | SINE (Alu) | CEP44 | Intron | 2 |
chr4:185 056 645 | 307 | SINE (Alu) | LINC02436 | Intron | 2 |
chr4:185 440 757 | 302 | SINE (Alu) | C4orf47 | Intron | 2 |
chr4:185 460 990 | 286 | SINE (Alu) | CCDC110 | Intron | 2 |
chr5:1 812 525 | 312 | SINE (Alu) | NDUFS6 | Intron | 2 |
chr5:3 383 808 | 143 | SINE (Alu) | LINC01019 | Intron | 1 |
chr5:10 634 867 | 319 | SINE (Alu) | ANKRD33B | Intron | 2 |
chr5:13 827 484 | 617 | LTR (ERVL) | DNAH5 | Intron | 2 |
chr5:14 685 815 | 222 | SINE (Alu) | OTULIN | Intron | 2 |
chr5:16 716 503 | 310 | SINE (Alu) | MYO10 | Intron | 2 |
chr5:17 712 495 | 334 | SINE (Alu) | LINC02223 | Intron | 2 |
chr5:20 398 762 | 63 | LINE (L1) | CDH18 | Intron | 1 |
chr5:20 463 225 | 163 | SINE (Alu) | CDH18 | Intron | 2 |
chr5:20 471 978 | 279 | LINE (L2) | CDH18 | Intron | 2 |
chr5:25 233 803 | 294 | SINE (Alu) | LINC02211 | Intron | 2 |
chr5:32 741 049 | 329 | SINE (Alu) | NPR3 | Intron | 2 |
chr5:32 974 396 | 1 061 | LINE (L1) | LOC105374715 | Intron | 2 |
chr5:33 633 230 | 5 225 | LINE (L1) | ADAMTS12 | Intron | 2 |
chr5:37 563 671 | 93 | Retroposon (SVA) | WDR70 | Intron | 2 |
chr5:37 688 692 | 282 | SINE (Alu) | WDR70 | Intron | 2 |
chr5:39 292 866 | 332 | SINE (Alu) | C9 | Intron | 2 |
chr5:39 938 350 | 325 | SINE (Alu) | LINC00603 | Intron | 2 |
chr5:42 666 178 | 337 | SINE (Alu) | GHR | Intron | 2 |
chr5:43 541 686 | 321 | SINE (Alu) | PAIP1 | Intron | 2 |
chr5:55 433 459 | 354 | SINE (Alu) | PLPP1 | Intron | 2 |
chr5:62 339 522 | 307 | SINE (Alu) | KIF2A | Intron | 2 |
chr5:62 561 273 | 323 | SINE (Alu) | IPO11 | Intron | 2 |
chr5:65 940 655 | 49 | Retroposon (SVA) | ERBIN | Intron | 2 |
chr5:68 967 632 | 650 | LINE (L1) | LOC107984116 | Intron | 2 |
chr5:69 515 538 | 97 | Retroposon (SVA) | OCLN | Intron | 2 |
chr5:76 172 411 | 50 | Retroposon (SVA) | SV2C | Intron | 2 |
chr5:77 395 389 | 314 | SINE (Alu) | PDE8B | Intron | 2 |
chr5:77 794 930 | 123 | Retroposon (SVA) | TBCA | Intron | 2 |
chr5:79 147 046 | 300 | SINE (Alu) | DMGDH | Intron | 2 |
chr5:87 076 864 | 294 | SINE (Alu) | LOC101929380 | Intron | 2 |
chr5:90 154 953 | 6 076 | LINE (L1) | LINC01339 | Intron | 1 |
chr5:90 556 032 | 326 | SINE (Alu) | ADGRV1 | Intron | 2 |
chr5:90 595 328 | 176 | Retroposon (SVA) | ADGRV1 | Intron | 1 |
chr5:90 702 006 | 154 | SINE (Alu) | ADGRV1 | Intron | 2 |
chr5:95 658 505 | 323 | SINE (Alu) | LOC105379090 | Intron | 2 |
chr5:104 402 721 | 291 | SINE (Alu) | NIHCOLE | Intron | 2 |
chr5:110 750 212 | 171 | SINE (Alu) | SLC25A46 | Intron | 2 |
chr5:111 450 624 | 186 | SINE (Alu) | CAMK4 | Intron | 2 |
chr5:115 404 024 | 285 | SINE (Alu) | LOC105379130 | Intron | 2 |
chr5:116 163 179 | 310 | SINE (Alu) | COMMD10 | Intron | 1 |
chr5:131 517 546 | 328 | SINE (Alu) | RAPGEF6 | Intron | 2 |
chr5:133 598 393 | 3 640 | LINE (L1) | FSTL4 | Intron | 2 |
chr5:137 538 132 | 175 | Retroposon (SVA) | SPOCK1 | Intron | 2 |
chr5:137 679 083 | 6 045 | LINE (L1) | KLHL3 | Intron | 2 |
chr5:142 379 077 | 312 | SINE (Alu) | SPRY4-AS1 | Intron | 2 |
chr5:142 537 961 | 312 | SINE (Alu) | SPRY4-AS1 | Intron | 2 |
chr5:142 975 429 | 304 | SINE (Alu) | ARHGAP26 | Intron | 2 |
chr5:146 990 048 | 318 | SINE (Alu) | PPP2R2B | Intron | 2 |
chr5:147 258 152 | 293 | SINE (Alu) | STK32A | Intron | 2 |
chr5:149 537 753 | 318 | SINE (Alu) | CSNK1A1 | Intron | 2 |
chr5:152 743 990 | 315 | SINE (Alu) | LINC01470 | Intron | 2 |
chr5:153 150 161 | 313 | SINE (Alu) | LINC01470 | Intron | 2 |
chr5:154 958 480 | 2 717 | Retroposon (SVA) | MRPL22 | Promoter | 2 |
chr5:154 958 480 | 2 717 | Retroposon (SVA) | MRPL22 | Intron | 2 |
chr5:155 906 881 | 2 491 | LINE (L1) | SGCD | Intron | 2 |
chr5:162 530 740 | 5 464 | LINE (L1) | LOC105377697 | Intron | 2 |
chr5:162 804 935 | 315 | SINE (Alu) | LOC105377697 | Intron | 1 |
chr5:163 392 841 | 172 | LINE (L1) | LOC105377697 | Intron | 2 |
chr5:170 774 320 | 310 | SINE (Alu) | GABRP | Intron | 2 |
chr5:176 305 301 | 499 | Retroposon (SVA) | SIMC1 | Intron | 2 |
chr5:176 306 174 | 49 | Retroposon (SVA) | SIMC1 | Intron | 2 |
chr5:176 306 393 | 225 | LINE (L1) | SIMC1 | Intron | 2 |
chr5:177 635 730 | 1 222 | LINE (L1) | LOC202181 | Intron | 2 |
chr5:178 458 165 | 62 | LINE (L1) | COL23A1 | Intron | 2 |
chr6:5 348 526 | 320 | SINE (Alu) | FARS2 | Intron | 2 |
chr6:5 488 638 | 123 | SINE (Alu) | FARS2 | Intron | 2 |
chr6:8 110 692 | 329 | SINE (Alu) | LOC105374910 | Intron | 2 |
chr6:13 459 344 | 318 | SINE (Alu) | GFOD1 | Intron | 2 |
chr6:17 650 653 | 331 | SINE (Alu) | NUP153 | Intron | 2 |
chr6:17 874 944 | 316 | SINE (Alu) | KIF13A | Intron | 2 |
chr6:21 851 912 | 125 | Retroposon (SVA) | CASC15 | Intron | 1 |
chr6:27 485 377 | 361 | Retroposon (SVA) | LOC105375001 | Intron | 1 |
chr6:29 851 078 | 318 | SINE (Alu) | LOC105375010 | Intron | 2 |
chr6:30 815 374 | 100 | LTR (ERV1) | LINC00243 | Intron | 2 |
chr6:31 471 222 | 313 | SINE (Alu) | HCP5 | Intron | 2 |
chr6:31 498 462 | 143 | SINE (Alu) | MICB | Intron | 2 |
chr6:32 520 783 | 314 | SINE (Alu) | HLA-DRB5 | Intron | 1 |
chr6:32 523 879 | 314 | SINE (Alu) | HLA-DRB5 | Intron | 1 |
chr6:32 525 047 | 327 | SINE (Alu) | HLA-DRB5 | Intron | 2 |
chr6:32 529 429 | 276 | SINE (Alu) | HLA-DRB5 | Intron | 2 |
chr6:32 590 720 | 1 118 | LTR (ERVK) | HLA-DRB1 | Promoter | 2 |
chr6:32 663 910 | 317 | SINE (Alu) | HLA-DQB1 | Intron | 2 |
chr6:34 398 183 | 176 | Retroposon (SVA) | NUDT3 | Intron | 1 |
chr6:34 398 361 | 77 | Retroposon (SVA) | NUDT3 | Intron | 1 |
chr6:36 363 392 | 101 | LTR (ERV1) | ETV7 | Intron | 1 |
chr6:38 964 348 | 344 | Retroposon (SVA) | DNAH8 | Intron | 2 |
chr6:38 964 349 | 68 | Retroposon (SVA) | DNAH8 | Intron | 1 |
chr6:42 702 567 | 314 | SINE (Alu) | PRPH2 | Intron | 2 |
chr6:43 352 185 | 66 | LINE (L1) | ZNF318 | Intron | 2 |
chr6:43 927 736 | 314 | SINE (Alu) | LINC01512 | Intron | 2 |
chr6:44 146 438 | 978 | Retroposon (SVA) | TMEM63B | Intron | 2 |
chr6:44 319 523 | 605 | LINE (L2) | SPATS1 | Intron | 2 |
chr6:45 292 724 | 324 | SINE (Alu) | SUPT3H | Intron | 2 |
chr6:47 505 642 | 803 | Retroposon (SVA) | CD2AP | Intron | 2 |
chr6:49 487 167 | 100 | LINE (L1) | CENPQ | Intron | 2 |
chr6:51 982 232 | 1 058 | Retroposon (SVA) | PKHD1 | Intron | 1 |
chr6:52 064 863 | 317 | SINE (Alu) | PKHD1 | Intron | 1 |
chr6:56 837 915 | 324 | SINE (Alu) | DST | Intron | 2 |
chr6:64 312 982 | 307 | LINE (L1) | EYS | Intron | 1 |
chr6:65 276 700 | 306 | SINE (Alu) | EYS | Intron | 2 |
chr6:65 454 072 | 308 | SINE (Alu) | EYS | Intron | 2 |
chr6:68 289 068 | 586 | LINE (L1) | LINC02549 | Intron | 2 |
chr6:68 833 560 | 326 | SINE (Alu) | ADGRB3 | Intron | 2 |
chr6:68 932 875 | 328 | SINE (Alu) | ADGRB3 | Intron | 2 |
chr6:69 061 778 | 55 | LINE (L1) | ADGRB3 | Intron | 2 |
chr6:69 122 017 | 75 | Retroposon (SVA) | ADGRB3 | Intron | 2 |
chr6:71 330 382 | 313 | SINE (Alu) | LINC00472 | Intron | 2 |
chr6:72 043 661 | 301 | SINE (Alu) | RIMS1 | Intron | 2 |
chr6:72 089 795 | 6 089 | LINE (L1) | RIMS1 | Intron | 1 |
chr6:73 601 482 | 274 | Retroposon (SVA) | SLC17A5 | Intron | 2 |
chr6:74 628 503 | 325 | SINE (Alu) | LOC101928516 | Intron | 2 |
chr6:77 707 035 | 321 | SINE (Alu) | MEI4 | Intron | 2 |
chr6:88 947 736 | 107 | Retroposon (SVA) | RNGTT | Intron | 1 |
chr6:90 243 280 | 6 067 | LINE (L1) | BACH2 | Intron | 2 |
chr6:94 658 640 | 331 | SINE (Alu) | LOC105377901 | Intron | 2 |
chr6:96 193 217 | 1 013 | LINE (L1) | FUT9 | Intron | 2 |
chr6:96 497 728 | 68 | LINE (L1) | UFL1-AS1 | Intron | 2 |
chr6:96 569 793 | 319 | SINE (Alu) | FHL5 | Intron | 2 |
chr6:97 803 451 | 304 | SINE (Alu) | LOC101927314 | Intron | 2 |
chr6:101 835 882 | 1 269 | LINE (L1) | GRIK2 | Intron | 2 |
chr6:106 365 678 | 322 | SINE (Alu) | CRYBG1 | Intron | 2 |
chr6:109 047 033 | 674 | Retroposon (SVA) | SESN1 | Intron | 1 |
chr6:109 047 060 | 294 | Retroposon (SVA) | SESN1 | Intron | 1 |
chr6:109 781 771 | 299 | SINE (Alu) | FIG4 | Intron | 2 |
chr6:110 473 738 | 308 | SINE (Alu) | SLC22A16 | Intron | 2 |
chr6:114 921 892 | 74 | LINE (L1) | LOC107986639 | Intron | 2 |
chr6:115 985 917 | 289 | SINE (Alu) | FRK | Intron | 2 |
chr6:116 522 978 | 316 | SINE (Alu) | TRAPPC3L | Intron | 2 |
chr6:118 304 984 | 295 | SINE (Alu) | SLC35F1 | Intron | 2 |
chr6:122 658 846 | 320 | SINE (Alu) | PKIB | Intron | 2 |
chr6:130 293 637 | 283 | SINE (Alu) | SAMD3 | Intron | 2 |
chr6:130 952 342 | 320 | SINE (Alu) | EPB41L2 | Intron | 2 |
chr6:131 695 957 | 328 | SINE (Alu) | ENPP3 | Intron | 2 |
chr6:133 410 622 | 177 | SINE (Alu) | EYA4 | Intron | 2 |
chr6:138 973 581 | 320 | SINE (Alu) | REPS1 | Intron | 1 |
chr6:142 128 962 | 6 021 | LINE (L1) | NMBR | Intron | 2 |
chr6:143 630 226 | 313 | SINE (Alu) | PHACTR2 | Intron | 2 |
chr6:145 698 463 | 343 | SINE (Alu) | EPM2A | Intron | 2 |
chr6:147 874 656 | 2 643 | LINE (L1) | SAMD5 | Intron | 2 |
chr6:155 996 968 | 307 | SINE (Alu) | LOC101928923 | Intron | 2 |
chr6:157 076 539 | 327 | SINE (Alu) | ARID1B | Intron | 2 |
chr6:158 127 369 | 303 | Retroposon (SVA) | SERAC1 | Intron | 2 |
chr6:158 239 915 | 402 | Retroposon (SVA) | TULP4 | Intron | 1 |
chr6:158 349 077 | 263 | Retroposon (SVA) | TULP4 | Intron | 2 |
chr6:158 783 391 | 325 | SINE (Alu) | EZR | Intron | 2 |
chr6:161 760 223 | 4 003 | LINE (L1) | PRKN | Intron | 2 |
chr6:162 592 818 | 360 | SINE (Alu) | PRKN | Intron | 2 |
chr6:163 046 353 | 327 | SINE (Alu) | PACRG | Intron | 2 |
chr6:165 866 403 | 324 | SINE (Alu) | PDE10A | Intron | 1 |
chr6:170 185 527 | 328 | SINE (Alu) | LOC154449 | Intron | 2 |
chr7:1 116 536 | 177 | Retroposon (SVA) | C7orf50 | Intron | 1 |
chr7:2 268 715 | 127 | Retroposon (SVA) | SNX8 | Intron | 1 |
chr7:8 495 321 | 317 | SINE (Alu) | NXPH1 | Intron | 2 |
chr7:10 465 264 | 352 | Retroposon (SVA) | MGC4859 | Intron | 2 |
chr7:18 282 964 | 279 | SINE (Alu) | HDAC9 | Intron | 2 |
chr7:19 478 703 | 4 752 | LINE (L1) | LOC105375180 | Intron | 2 |
chr7:22 813 861 | 311 | SINE (Alu) | TOMM7 | Intron | 2 |
chr7:23 637 228 | 77 | Retroposon (SVA) | CCDC126 | Intron | 2 |
chr7:26 168 425 | 120 | LINE (L1) | NFE2L3 | Intron | 2 |
chr7:31 761 097 | 81 | SINE (MIR) | PDE1C | Intron | 2 |
chr7:36 212 541 | 319 | SINE (Alu) | EEPD1 | Intron | 2 |
chr7:39 564 828 | 324 | SINE (Alu) | YAE1-DT | Intron | 2 |
chr7:45 749 604 | 325 | SINE (Alu) | SEPTIN7P2 | Intron | 2 |
chr7:47 511 477 | 336 | SINE (Alu) | TNS3 | Intron | 2 |
chr7:64 809 505 | 125 | Retroposon (SVA) | ZNF138 | Intron | 2 |
chr7:65 391 384 | 304 | SINE (Alu) | ZNF92 | Intron | 1 |
chr7:69 293 439 | 332 | SINE (Alu) | LOC105375345 | Intron | 2 |
chr7:74 556 789 | 179 | SINE (Alu) | GTF2IRD1 | Intron | 2 |
chr7:79 976 821 | 69 | LTR (ERV1) | GNAI1 | Intron | 2 |
chr7:82 372 562 | 326 | SINE (Alu) | CACNA2D1 | Intron | 2 |
chr7:82 801 191 | 316 | SINE (Alu) | PCLO | Intron | 2 |
chr7:83 460 626 | 63 | LTR (ERV1) | SEMA3E | Intron | 2 |
chr7:84 299 804 | 69 | SINE (Alu) | SEMA3A | Intron | 2 |
chr7:85 113 607 | 307 | SINE (Alu) | SEMA3D | Intron | 2 |
chr7:88 751 024 | 316 | SINE (Alu) | LOC107986816 | Intron | 2 |
chr7:89 215 578 | 343 | SINE (Alu) | ZNF804B | Intron | 2 |
chr7:92 122 219 | 315 | SINE (Alu) | CYP51A1 | Intron | 2 |
chr7:93 728 066 | 315 | SINE (Alu) | GNGT1 | Intron | 2 |
chr7:95 149 736 | 328 | SINE (Alu) | PPP1R9A | Intron | 1 |
chr7:95 248 185 | 282 | SINE (Alu) | PPP1R9A | Intron | 2 |
chr7:100 948 850 | 51 | SINE (Alu) | MUC3A | Promoter | 2 |
chr7:100 973 082 | 331 | SINE (Alu) | MUC12 | Intron | 2 |
chr7:102 549 902 | 83 | SINE (Alu) | POLR2J3-UPK3BL2 | Intron | 2 |
chr7:105 255 127 | 321 | SINE (Alu) | SRPK2 | Intron | 2 |
chr7:105 924 008 | 312 | SINE (Alu) | CDHR3 | Intron | 2 |
chr7:108 188 803 | 6 047 | LINE (L1) | NRCAM | Intron | 2 |
chr7:110 844 692 | 96 | LINE (L1) | IMMP2L | Intron | 2 |
chr7:112 238 780 | 310 | SINE (Alu) | ZNF277 | Intron | 2 |
chr7:112 732 975 | 322 | SINE (Alu) | LOC101928012 | Intron | 2 |
chr7:118 443 246 | 316 | SINE (Alu) | ANKRD7 | Intron | 2 |
chr7:124 141 305 | 281 | SINE (Alu) | LOC102724577 | Intron | 2 |
chr7:124 952 959 | 316 | SINE (Alu) | POT1-AS1 | Intron | 2 |
chr7:125 022 560 | 165 | LTR (ERVL) | POT1-AS1 | Intron | 2 |
chr7:128 569 091 | 239 | SINE (Alu) | LINC01000 | Intron | 2 |
chr7:128 577 278 | 309 | Retroposon (SVA) | LINC01000 | Intron | 2 |
chr7:129 426 720 | 310 | SINE (Alu) | AHCYL2 | Intron | 2 |
chr7:129 476 202 | 92 | Retroposon (SVA) | STRIP2 | Intron | 1 |
chr7:130 591 390 | 628 | Retroposon (SVA) | COPG2 | Intron | 2 |
chr7:130 950 437 | 340 | SINE (Alu) | LINC-PINT | Intron | 2 |
chr7:131 224 137 | 144 | SINE (Alu) | MKLN1 | Intron | 2 |
chr7:138 789 840 | 173 | SINE (Alu) | ATP6V0A4 | Intron | 2 |
chr7:138 878 760 | 282 | SINE (Alu) | KIAA1549 | Intron | 2 |
chr7:139 101 477 | 374 | Retroposon (SVA) | ZC3HAV1 | Intron | 2 |
chr7:140 362 571 | 214 | Retroposon (SVA) | SLC37A3 | Intron | 1 |
chr7:154 590 557 | 330 | SINE (Alu) | DPP6 | Intron | 2 |
chr7:155 367 319 | 194 | Retroposon (SVA) | BLACE | Intron | 1 |
chr7:157 558 086 | 339 | SINE (Alu) | PTPRN2 | Intron | 2 |
chr7:157 656 079 | 316 | SINE (Alu) | PTPRN2 | Intron | 1 |
chr7:902 456 | 174 | SINE (Alu) | ADAP1 | Intron | 2 |
chr8:3 076 325 | 61 | LTR (ERVL) | CSMD1 | Intron | 2 |
chr8:3 769 437 | 325 | SINE (Alu) | CSMD1 | Intron | 2 |
chr8:6 187 444 | 317 | SINE (Alu) | LOC105377797 | Intron | 1 |
chr8:6 188 676 | 321 | SINE (Alu) | LOC105377797 | Intron | 2 |
chr8:6 196 793 | 92 | LINE (L1) | LOC105377797 | Intron | 2 |
chr8:9 062 603 | 321 | SINE (Alu) | ERI1 | Intron | 2 |
chr8:12 641 514 | 329 | SINE (Alu) | LOC729732 | Intron | 2 |
chr8:13 099 050 | 334 | SINE (Alu) | DLC1 | Intron | 2 |
chr8:15 690 996 | 322 | SINE (Alu) | TUSC3 | Intron | 1 |
chr8:16 245 296 | 274 | SINE (Alu) | MSR1 | Intron | 2 |
chr8:16 674 061 | 847 | LINE (L1) | LOC101929028 | Intron | 2 |
chr8:22 625 878 | 329 | SINE (Alu) | BIN3 | Intron | 1 |
chr8:25 315 133 | 301 | SINE (Alu) | DOCK5 | Intron | 2 |
chr8:25 462 547 | 49 | SINE (Alu) | CDCA2 | Intron | 2 |
chr8:28 684 943 | 129 | LINE (L1) | EXTL3 | Intron | 2 |
chr8:32 502 454 | 313 | SINE (Alu) | NRG1 | Intron | 2 |
chr8:32 514 935 | 196 | LINE (L1) | NRG1 | Intron | 2 |
chr8:33 904 132 | 292 | SINE (Alu) | LOC105379364 | Intron | 2 |
chr8:40 575 651 | 6 101 | LINE (L1) | ZMAT4 | Intron | 2 |
chr8:41 299 575 | 135 | SINE (Alu) | SFRP1 | Intron | 2 |
chr8:42 182 377 | 310 | SINE (Alu) | PLAT | Intron | 2 |
chr8:43 179 661 | 97 | Retroposon (SVA) | HGSNAT | Promoter | 2 |
chr8:43 179 661 | 97 | Retroposon (SVA) | HGSNAT | Intron | 2 |
chr8:55 120 512 | 333 | SINE (Alu) | XKR4 | Intron | 2 |
chr8:60 614 219 | 321 | SINE (Alu) | RAB2A | Intron | 2 |
chr8:64 686 418 | 75 | Retroposon (SVA) | CYP7B1 | Intron | 2 |
chr8:71 486 984 | 6 033 | LINE (L1) | EYA1 | Intron | 2 |
chr8:73 371 133 | 326 | SINE (Alu) | LOC105375899 | Promoter | 2 |
chr8:74 463 097 | 319 | SINE (Alu) | GDAP1 | Intron | 2 |
chr8:82 192 113 | 76 | LTR (ERV1) | LOC105375931 | Intron | 2 |
chr8:82 360 738 | 125 | SINE (Alu) | LOC105375931 | Intron | 2 |
chr8:84 525 029 | 307 | SINE (Alu) | RALYL | Intron | 2 |
chr8:86 302 813 | 113 | LINE (L1) | SLC7A13 | Intron | 2 |
chr8:86 964 152 | 73 | LTR (ERV1) | CNBD1 | Intron | 2 |
chr8:89 657 666 | 339 | SINE (Alu) | RIPK2-DT | Intron | 2 |
chr8:90 686 770 | 518 | LTR (ERV1) | LOC105375633 | Intron | 2 |
chr8:93 150 241 | 314 | SINE (Alu) | LINC02906 | Intron | 2 |
chr8:95 455 549 | 315 | SINE (Alu) | CFAP418-AS1 | Intron | 1 |
chr8:104 888 238 | 335 | SINE (Alu) | LOC105375694 | Intron | 2 |
chr8:105 652 282 | 325 | SINE (Alu) | ZFPM2 | Intron | 2 |
chr8:109 337 073 | 302 | SINE (Alu) | ENY2 | Intron | 2 |
chr8:116 034 779 | 276 | SINE (Alu) | LINC00536 | Intron | 2 |
chr8:121 651 129 | 299 | SINE (Alu) | HAS2-AS1 | Intron | 2 |
chr8:121 718 766 | 322 | SINE (Alu) | HAS2-AS1 | Intron | 2 |
chr8:122 515 557 | 311 | SINE (Alu) | LINC01151 | Intron | 2 |
chr8:124 877 714 | 283 | SINE (Alu) | LINC00964 | Intron | 2 |
chr8:126 107 112 | 290 | SINE (Alu) | LINC00861 | Intron | 2 |
chr8:126 853 220 | 292 | SINE (Alu) | LOC105375751 | Intron | 2 |
chr8:127 025 871 | 321 | SINE (Alu) | LOC105375751 | Intron | 1 |
chr8:128 695 771 | 322 | SINE (Alu) | LINC00976 | Intron | 2 |
chr8:128 825 938 | 179 | Retroposon (SVA) | LINC00976 | Intron | 1 |
chr8:129 258 242 | 278 | SINE (Alu) | CCDC26 | Intron | 2 |
chr8:131 930 463 | 323 | SINE (Alu) | EFR3A | Intron | 2 |
chr8:138 313 721 | 313 | SINE (Alu) | FAM135B | Intron | 2 |
chr8:140 037 950 | 334 | SINE (Alu) | TRAPPC9 | Intron | 2 |
chr9:4 237 128 | 292 | SINE (Alu) | GLIS3 | Intron | 2 |
chr9:4 814 226 | 287 | SINE (Alu) | RCL1 | Intron | 2 |
chr9:5 434 137 | 264 | Retroposon (SVA) | PLGRKT | Intron | 2 |
chr9:6 807 776 | 148 | Retroposon (SVA) | KDM4C | Intron | 1 |
chr9:7 035 315 | 319 | SINE (Alu) | KDM4C | Intron | 2 |
chr9:7 852 522 | 326 | SINE (Alu) | DMAC1 | Intron | 2 |
chr9:8 645 762 | 274 | SINE (Alu) | PTPRD | Intron | 2 |
chr9:14 877 434 | 320 | SINE (Alu) | FREM1 | Intron | 2 |
chr9:15 234 394 | 89 | Retroposon (SVA) | TTC39B | Intron | 2 |
chr9:28 960 604 | 324 | SINE (Alu) | LINGO2 | Intron | 2 |
chr9:37 594 236 | 325 | SINE (Alu) | SHB | Intron | 2 |
chr9:41 047 836 | 787 | LINE (L1) | FRG1HP | Intron | 2 |
chr9:61 209 379 | 323 | SINE (Alu) | FAM74A4 | Intron | 2 |
chr9:63 838 317 | 309 | SINE (Alu) | FRG1JP | Intron | 2 |
chr9:66 078 990 | 359 | LTR (ERVL) | ANKRD20A3P | Intron | 2 |
chr9:67 083 505 | 298 | SINE (Alu) | CNTNAP3P2 | Intron | 2 |
chr9:70 162 496 | 6 065 | LINE (L1) | MAMDC2 | Intron | 2 |
chr9:70 974 314 | 132 | SINE (Alu) | TRPM3 | Intron | 2 |
chr9:71 929 859 | 338 | SINE (Alu) | C9orf85 | Intron | 2 |
chr9:72 616 616 | 314 | SINE (Alu) | TMC1 | Intron | 2 |
chr9:72 928 052 | 343 | SINE (Alu) | ALDH1A1 | Intron | 2 |
chr9:76 063 864 | 405 | Retroposon (SVA) | PCSK5 | Intron | 2 |
chr9:76 836 353 | 329 | SINE (Alu) | PRUNE2 | Intron | 2 |
chr9:77 294 971 | 321 | SINE (Alu) | VPS13A | Intron | 2 |
chr9:91 296 196 | 731 | LINE (L1) | AUH | Intron | 2 |
chr9:92 520 051 | 320 | SINE (Alu) | CENPP | Intron | 2 |
chr9:94 147 772 | 315 | SINE (Alu) | LOC107987099 | Promoter | 2 |
chr9:94 625 119 | 313 | SINE (Alu) | FBP1 | Intron | 2 |
chr9:96 301 415 | 319 | SINE (Alu) | HSD17B3 | Intron | 2 |
chr9:101 447 693 | 310 | SINE (Alu) | ALDOB | Intron | 2 |
chr9:103 314 170 | 191 | SINE (Alu) | LINC01492 | Intron | 1 |
chr9:105 055 062 | 335 | LTR (ERV1) | LOC112268038 | Intron | 1 |
chr9:107 460 893 | 60 | SINE (Alu) | LINC01509 | Intron | 2 |
chr9:110 729 242 | 321 | SINE (Alu) | MUSK | Intron | 2 |
chr9:112 514 846 | 225 | Retroposon (SVA) | KIAA1958 | Intron | 2 |
chr9:113 207 343 | 320 | SINE (Alu) | FKBP15 | Intron | 2 |
chr9:116 840 544 | 499 | Retroposon (SVA) | LOC105376239 | Intron | 2 |
chr9:121 971 184 | 308 | Retroposon (SVA) | TTLL11 | Intron | 1 |
chr9:121 971 409 | 78 | Retroposon (SVA) | TTLL11 | Intron | 1 |
chr9:123 802 496 | 79 | LINE (L2) | DENND1A | Intron | 2 |
chr9:125 458 887 | 431 | Retroposon (SVA) | MAPKAP1 | Intron | 2 |
chr9:125 577 664 | 256 | Retroposon (SVA) | MAPKAP1 | Intron | 2 |
chr9:125 780 971 | 115 | Retroposon (SVA) | PBX3 | Intron | 2 |
chr9:131 414 409 | 2 961 | Retroposon (SVA) | PRRC2B | Intron | 2 |
chr9:136 074 444 | 477 | SINE (Alu) | NACC2 | Intron | 2 |
chr9:138 227 893 | 228 | LINE (L1) | FAM157B | Intron | 1 |
chr9:262 447 | 326 | SINE (Alu) | DOCK8 | Intron | 2 |
chr9:848 895 | 333 | SINE (Alu) | DMRT1 | Intron | 2 |
chr9:862 106 | 114 | Retroposon (SVA) | DMRT1 | Intron | 2 |
chr10:1 250 037 | 326 | SINE (Alu) | LINC00200 | Intron | 2 |
chr10:9 862 428 | 325 | SINE (Alu) | LINC02663 | Intron | 2 |
chr10:14 442 801 | 323 | SINE (Alu) | FRMD4A | Intron | 2 |
chr10:19 261 790 | 315 | SINE (Alu) | MALRD1 | Intron | 2 |
chr10:19 497 365 | 295 | SINE (Alu) | MALRD1 | Intron | 2 |
chr10:21 057 588 | 50 | SINE (Alu) | NEBL | Intron | 2 |
chr10:25 418 756 | 6 038 | LINE (L1) | GPR158 | Intron | 2 |
chr10:25 668 385 | 324 | SINE (Alu) | LINC00836 | Intron | 2 |
chr10:26 002 653 | 111 | LTR (ERV1) | MYO3A | Intron | 1 |
chr10:26 008 694 | 330 | SINE (Alu) | MYO3A | Intron | 2 |
chr10:26 564 036 | 317 | SINE (Alu) | APBB1IP | Intron | 2 |
chr10:26 587 715 | 270 | SINE (Alu) | LINC03028 | Intron | 1 |
chr10:26 672 154 | 182 | SINE (Alu) | SELENOOLP | Intron | 2 |
chr10:28 813 597 | 312 | SINE (Alu) | LINC01517 | Intron | 2 |
chr10:28 816 354 | 313 | SINE (Alu) | LINC01517 | Intron | 2 |
chr10:32 647 469 | 55 | SINE (Alu) | CCDC7 | Intron | 2 |
chr10:42 754 636 | 324 | SINE (Alu) | LOC283028 | Promoter | 2 |
chr10:46 647 422 | 321 | SINE (Alu) | SHLD2P1 | Intron | 2 |
chr10:46 876 544 | 303 | SINE (Alu) | FRMPD2B | Promoter | 2 |
chr10:46 876 544 | 303 | SINE (Alu) | FRMPD2B | Intron | 2 |
chr10:50 479 036 | 345 | SINE (Alu) | SGMS1 | Intron | 2 |
chr10:52 707 167 | 322 | SINE (Alu) | LNCAROD | Intron | 2 |
chr10:52 727 550 | 70 | SINE (Alu) | LNCAROD | Intron | 2 |
chr10:54 167 758 | 82 | LTR (ERV1) | PCDH15 | Intron | 2 |
chr10:54 223 519 | 321 | SINE (Alu) | PCDH15 | Intron | 2 |
chr10:54 421 465 | 329 | SINE (Alu) | PCDH15 | Intron | 1 |
chr10:54 741 154 | 514 | LINE (L1) | PCDH15 | Intron | 2 |
chr10:55 002 597 | 62 | LTR (ERV1) | PCDH15 | Intron | 2 |
chr10:55 142 592 | 316 | SINE (Alu) | PCDH15 | Intron | 2 |
chr10:59 225 142 | 323 | SINE (Alu) | PHYHIPL | Intron | 2 |
chr10:66 289 347 | 246 | SINE (Alu) | CTNNA3 | Intron | 2 |
chr10:66 576 999 | 328 | SINE (Alu) | CTNNA3 | Intron | 2 |
chr10:68 235 132 | 325 | SINE (Alu) | LINC02640 | Intron | 2 |
chr10:69 850 403 | 310 | SINE (Alu) | COL13A1 | Intron | 2 |
chr10:70 407 981 | 321 | Retroposon (SVA) | EIF4EBP2 | Intron | 2 |
chr10:70 845 655 | 316 | SINE (Alu) | SGPL1 | Intron | 2 |
chr10:71 433 771 | 326 | SINE (Alu) | CDH23 | Intron | 2 |
chr10:74 470 576 | 142 | LINE (L1) | ADK | Intron | 2 |
chr10:75 333 347 | 412 | Retroposon (SVA) | ZNF503-AS1 | Intron | 1 |
chr10:75 333 727 | 141 | Retroposon (SVA) | ZNF503-AS1 | Intron | 2 |
chr10:75 333 727 | 95 | Retroposon (SVA) | ZNF503-AS1 | Intron | 1 |
chr10:84 223 486 | 318 | SINE (Alu) | LRIT2 | Intron | 2 |
chr10:86 203 533 | 304 | SINE (Alu) | GRID1 | Intron | 2 |
chr10:90 087 413 | 55 | LTR (ERV1) | LINC01374 | Intron | 2 |
chr10:90 455 298 | 313 | SINE (Alu) | LINC02653 | Intron | 2 |
chr10:90 467 738 | 316 | SINE (Alu) | LINC02653 | Intron | 2 |
chr10:92 975 818 | 222 | Retroposon (SVA) | EXOC6 | Intron | 2 |
chr10:94 523 176 | 3 279 | Retroposon (SVA) | TBC1D12 | Intron | 2 |
chr10:95 908 766 | 315 | SINE (Alu) | ENTPD1-AS1 | Promoter | 2 |
chr10:95 908 766 | 315 | SINE (Alu) | CC2D2B | Intron | 2 |
chr10:98 547 137 | 154 | SINE (Alu) | HPSE2 | Intron | 2 |
chr10:99 838 924 | 587 | Retroposon (SVA) | ABCC2 | Intron | 1 |
chr10:99 838 938 | 807 | Retroposon (SVA) | ABCC2 | Intron | 2 |
chr10:99 992 328 | 321 | SINE (Alu) | DNMBP | Intron | 2 |
chr10:102 000 593 | 319 | SINE (Alu) | ARMH3 | Intron | 2 |
chr10:102 036 224 | 141 | Retroposon (SVA) | ARMH3 | Intron | 2 |
chr10:103 129 597 | 229 | Retroposon (SVA) | NT5C2 | Intron | 2 |
chr10:104 057 441 | 192 | SINE (Alu) | COL17A1 | Intron | 2 |
chr10:104 807 120 | 328 | SINE (Alu) | SORCS3 | Intron | 2 |
chr10:113 690 039 | 124 | LINE (L1) | CASP7 | Intron | 1 |
chr10:115 944 243 | 321 | SINE (Alu) | ATRNL1 | Intron | 2 |
chr10:121 911 777 | 162 | SINE (Alu) | ATE1 | Intron | 2 |
chr10:122 976 473 | 319 | SINE (Alu) | PSTK | Intron | 2 |
chr10:130 096 568 | 97 | LINE (L1) | C10orf143 | Intron | 2 |
chr10:130 254 744 | 310 | SINE (Alu) | LINC02646 | Intron | 2 |
chr10:130 347 306 | 320 | SINE (Alu) | LINC02646 | Intron | 1 |
chr10:133 217 518 | 117 | SINE (Alu) | KNDC1 | Intron | 1 |
chr11:1 576 987 | 66 | SINE (Alu) | KRTAP5-AS1 | Intron | 2 |
chr11:5 863 905 | 317 | SINE (Alu) | TRIM5 | Intron | 2 |
chr11:6 349 772 | 66 | SINE (Alu) | LOC101927825 | Intron | 1 |
chr11:6 349 846 | 67 | SINE (Alu) | LOC101927825 | Intron | 1 |
chr11:7 591 451 | 320 | SINE (Alu) | PPFIBP2 | Intron | 2 |
chr11:8 865 752 | 317 | SINE (Alu) | DENND2B | Intron | 2 |
chr11:10 615 934 | 316 | SINE (Alu) | IRAG1 | Intron | 2 |
chr11:13 791 469 | 334 | SINE (Alu) | LINC02548 | Intron | 2 |
chr11:14 478 463 | 324 | SINE (Alu) | COPB1 | Intron | 2 |
chr11:19 361 213 | 324 | SINE (Alu) | NAV2 | Intron | 2 |
chr11:19 860 081 | 224 | Retroposon (SVA) | NAV2 | Intron | 2 |
chr11:22 241 253 | 123 | LINE (L1) | ANO5 | Intron | 2 |
chr11:24 771 395 | 319 | SINE (Alu) | LUZP2 | Intron | 2 |
chr11:26 271 711 | 302 | SINE (Alu) | ANO3 | Intron | 2 |
chr11:29 694 325 | 72 | LINE (L1) | LINC02755 | Intron | 2 |
chr11:31 930 547 | 324 | SINE (Alu) | RCN1 | Intron | 1 |
chr11:36 536 920 | 6 064 | LINE (L1) | RAG1 | Intron | 2 |
chr11:40 472 453 | 312 | SINE (Alu) | LRRC4C | Intron | 2 |
chr11:42 034 345 | 327 | SINE (Alu) | LINC02745 | Intron | 2 |
chr11:45 738 449 | 275 | Retroposon (SVA) | LOC100507384 | Intron | 2 |
chr11:49 634 261 | 302 | SINE (Alu) | GRM5P1 | Intron | 2 |
chr11:57 716 516 | 126 | Retroposon (SVA) | TMX2-CTNND1 | Intron | 1 |
chr11:58 139 863 | 64 | LINE (L1) | OR9Q1 | Intron | 2 |
chr11:58 404 363 | 1 495 | LINE (L1) | OR5B3 | Intron | 2 |
chr11:59 645 320 | 383 | Retroposon (SVA) | PATL1 | Intron | 2 |
chr11:63 893 355 | 259 | LINE (L1) | MARK2 | Intron | 2 |
chr11:65 239 636 | 128 | Retroposon (SVA) | SLC22A20P | Intron | 2 |
chr11:67 222 608 | 533 | Retroposon (SVA) | KDM2A | Intron | 2 |
chr11:74 270 503 | 264 | SINE (Alu) | P4HA3 | Promoter | 1 |
chr11:74 270 503 | 264 | SINE (Alu) | P4HA3 | Intron | 1 |
chr11:74 353 859 | 76 | Retroposon (SVA) | PGM2L1 | Intron | 2 |
chr11:74 556 414 | 59 | SINE (Alu) | POLD3 | Intron | 2 |
chr11:74 656 965 | 91 | LINE (L1) | POLD3 | Intron | 2 |
chr11:76 619 299 | 607 | Retroposon (SVA) | LINC02757 | Intron | 2 |
chr11:77 098 059 | 176 | Retroposon (SVA) | CAPN5 | Intron | 2 |
chr11:77 098 729 | 223 | Retroposon (SVA) | CAPN5 | Intron | 2 |
chr11:78 879 320 | 645 | Retroposon (SVA) | TENM4 | Intron | 2 |
chr11:82 182 176 | 92 | Retroposon (SVA) | MIR4300HG | Intron | 1 |
chr11:86 484 285 | 320 | SINE (Alu) | ME3 | Intron | 2 |
chr11:87 154 845 | 166 | LINE (L1) | TMEM135 | Intron | 2 |
chr11:89 474 978 | 338 | SINE (Alu) | NOX4 | Intron | 2 |
chr11:89 824 148 | 56 | LINE (L1) | LOC642414 | Intron | 2 |
chr11:90 267 331 | 185 | LINE (L1) | DISC1FP1 | Intron | 2 |
chr11:92 875 310 | 313 | SINE (Alu) | FAT3 | Intron | 2 |
chr11:101 041 046 | 317 | SINE (Alu) | PGR | Intron | 2 |
chr11:102 642 290 | 317 | SINE (Alu) | LOC101928477 | Intron | 2 |
chr11:103 330 537 | 322 | SINE (Alu) | DYNC2H1 | Intron | 2 |
chr11:103 921 859 | 327 | SINE (Alu) | PDGFD | Intron | 2 |
chr11:104 915 861 | 320 | SINE (Alu) | CASP4LP | Intron | 2 |
chr11:112 213 884 | 1 288 | LINE (L1) | BCO2 | Promoter | 2 |
chr11:112 213 884 | 1 288 | LINE (L1) | BCO2 | Intron | 2 |
chr11:112 331 792 | 137 | SINE (Alu) | LINC02762 | Intron | 1 |
chr11:112 331 905 | 138 | SINE (Alu) | LINC02762 | Intron | 1 |
chr11:119 253 538 | 266 | Retroposon (SVA) | CBL | Intron | 2 |
chr11:119 507 780 | 534 | Retroposon (SVA) | USP2-AS1 | Intron | 2 |
chr11:122 406 922 | 306 | SINE (Alu) | MIR100HG | Intron | 2 |
chr11:125 589 066 | 2 805 | Retroposon (SVA) | FEZ1 | Intron | 2 |
chr11:127 033 276 | 330 | SINE (Alu) | LOC101929473 | Intron | 2 |
chr11:127 045 419 | 351 | SINE (Alu) | LOC101929473 | Intron | 2 |
chr11:127 071 221 | 326 | SINE (Alu) | LOC101929473 | Intron | 2 |
chr11:129 889 646 | 315 | SINE (Alu) | NFRKB | Intron | 2 |
chr11:134 435 747 | 315 | LINE (L1) | B3GAT1-DT | Promoter | 2 |
chr11:134 435 747 | 315 | LINE (L1) | B3GAT1-DT | Intron | 2 |
chr11:428 013 | 320 | SINE (Alu) | ANO9 | Intron | 2 |
chr11:696 731 | 133 | SINE (Alu) | EPS8L2 | Intron | 2 |
chr11:711 989 | 300 | SINE (Alu) | EPS8L2 | Intron | 1 |
chr12:1 980 674 | 318 | SINE (Alu) | CACNA1C | Intron | 2 |
chr12:4 661 707 | 309 | SINE (Alu) | NDUFA9 | Intron | 2 |
chr12:4 734 674 | 215 | SINE (Alu) | NDUFA9 | Intron | 2 |
chr12:5 660 428 | 308 | SINE (Alu) | ANO2 | Intron | 2 |
chr12:7 451 371 | 284 | SINE (Alu) | CD163L1 | Intron | 2 |
chr12:8 184 233 | 439 | Retroposon (SVA) | ZNF705A | Intron | 2 |
chr12:8 184 720 | 48 | Retroposon (SVA) | ZNF705A | Intron | 1 |
chr12:9 349 116 | 79 | Retroposon (SVA) | LINC02367 | Intron | 2 |
chr12:10 081 587 | 318 | SINE (Alu) | CLEC1A | Intron | 2 |
chr12:11 092 598 | 132 | LTR (ERV1) | TAS2R43 | Promoter | 1 |
chr12:11 092 598 | 132 | LTR (ERV1) | PRH1-PRR4 | Intron | 1 |
chr12:11 398 220 | 791 | LINE (L1) | PRB2 | Intron | 2 |
chr12:12 456 841 | 310 | SINE (Alu) | BORCS5 | Intron | 1 |
chr12:12 780 744 | 1 782 | LINE (L1) | APOLD1 | Intron | 2 |
chr12:14 951 697 | 325 | SINE (Alu) | ARHGDIB | Promoter | 2 |
chr12:14 951 697 | 325 | SINE (Alu) | ARHGDIB | Intron | 2 |
chr12:19 653 272 | 283 | SINE (Alu) | AEBP2 | Intron | 2 |
chr12:21 933 008 | 333 | SINE (Alu) | ABCC9 | Intron | 2 |
chr12:26 785 263 | 175 | Retroposon (SVA) | ITPR2 | Intron | 1 |
chr12:26 785 883 | 125 | Retroposon (SVA) | ITPR2 | Intron | 2 |
chr12:27 368 142 | 329 | SINE (Alu) | BMAL2 | Promoter | 2 |
chr12:27 368 142 | 329 | SINE (Alu) | BMAL2 | Intron | 2 |
chr12:27 711 861 | 314 | SINE (Alu) | MRPS35 | Intron | 2 |
chr12:28 264 364 | 307 | SINE (Alu) | CCDC91 | Intron | 2 |
chr12:29 670 962 | 313 | SINE (Alu) | TMTC1 | Intron | 2 |
chr12:30 967 794 | 318 | SINE (Alu) | TSPAN11 | Intron | 2 |
chr12:31 650 021 | 315 | SINE (Alu) | ETFBKMT | Intron | 2 |
chr12:31 923 477 | 315 | SINE (Alu) | LINC02422 | Intron | 2 |
chr12:40 279 206 | 326 | SINE (Alu) | LRRK2 | Intron | 2 |
chr12:41 453 905 | 238 | SINE (Alu) | PDZRN4 | Intron | 2 |
chr12:42 228 294 | 97 | Retroposon (SVA) | YAF2 | Intron | 2 |
chr12:43 524 175 | 1 074 | LINE (L1) | ADAMTS20 | Intron | 2 |
chr12:43 745 751 | 321 | SINE (Alu) | PUS7L | Intron | 2 |
chr12:45 025 762 | 311 | SINE (Alu) | DBX2 | Intron | 2 |
chr12:47 918 691 | 318 | SINE (Alu) | VDR | Intron | 2 |
chr12:48 842 513 | 126 | Retroposon (SVA) | DDX23 | Intron | 1 |
chr12:48 842 672 | 126 | Retroposon (SVA) | DDX23 | Intron | 1 |
chr12:51 479 269 | 342 | SINE (Alu) | SLC4A8 | Intron | 2 |
chr12:56 558 296 | 307 | SINE (Alu) | RBMS2 | Intron | 2 |
chr12:62 023 592 | 319 | SINE (Alu) | TAFA2 | Intron | 2 |
chr12:62 486 254 | 321 | SINE (Alu) | MON2 | Intron | 2 |
chr12:64 029 802 | 87 | SINE (Alu) | SRGAP1 | Intron | 2 |
chr12:64 783 847 | 187 | SINE (Alu) | TBC1D30 | Intron | 2 |
chr12:66 512 564 | 313 | SINE (Alu) | GRIP1 | Intron | 1 |
chr12:66 617 787 | 324 | SINE (Alu) | GRIP1 | Intron | 2 |
chr12:70 086 200 | 63 | LTR (ERV1) | PRANCR | Intron | 2 |
chr12:78 003 152 | 327 | SINE (Alu) | NAV3 | Intron | 2 |
chr12:80 921 441 | 323 | SINE (Alu) | LIN7A | Intron | 2 |
chr12:85 112 496 | 779 | LINE (L1) | LRRIQ1 | Intron | 2 |
chr12:95 907 477 | 51 | Retroposon (SVA) | CCDC38 | Intron | 2 |
chr12:96 311 583 | 317 | SINE (Alu) | CDK17 | Intron | 2 |
chr12:103 643 940 | 48 | Retroposon (SVA) | STAB2 | Intron | 1 |
chr12:106 272 427 | 275 | SINE (Alu) | CKAP4 | Intron | 2 |
chr12:106 728 296 | 312 | SINE (Alu) | RFX4 | Intron | 2 |
chr12:110 950 967 | 128 | Retroposon (SVA) | LINC01405 | Intron | 2 |
chr12:112 339 309 | 349 | SINE (Alu) | HECTD4 | Intron | 2 |
chr12:113 872 509 | 147 | Retroposon (SVA) | RBM19 | Intron | 1 |
chr12:117 376 640 | 6 084 | LINE (L1) | NOS1 | Intron | 2 |
chr12:117 749 119 | 3 760 | LINE (L1) | KSR2 | Intron | 2 |
chr12:122 237 736 | 78 | SINE (Alu) | VPS33A | Intron | 2 |
chr12:131 926 418 | 79 | Retroposon (SVA) | LOC107984455 | Intron | 2 |
chr12:132 789 672 | 57 | SINE (Alu) | GOLGA3 | Intron | 2 |
chr12:132 868 572 | 181 | SINE (Alu) | CHFR | Intron | 2 |
chr12:425 297 | 2 487 | Retroposon (SVA) | CCDC77 | Intron | 2 |
chr12:676 194 | 133 | SINE (Alu) | LINC02455 | Intron | 2 |
chr13:18 196 939 | 196 | SINE (Alu) | FAM230C | Intron | 2 |
chr13:19 779 535 | 49 | Retroposon (SVA) | PSPC1 | Intron | 1 |
chr13:19 832 899 | 304 | SINE (Alu) | ZMYM5 | Intron | 2 |
chr13:21 320 624 | 286 | SINE (Alu) | MIPEPP3 | Intron | 2 |
chr13:21 448 216 | 146 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
chr13:21 448 382 | 77 | Retroposon (SVA) | ZDHHC20 | Intron | 2 |
chr13:28 964 737 | 317 | SINE (Alu) | MTUS2 | Intron | 1 |
chr13:28 990 630 | 66 | LTR (ERV1) | MTUS2 | Intron | 2 |
chr13:34 540 973 | 226 | Retroposon (SVA) | LINC02343 | Intron | 1 |
chr13:34 541 342 | 221 | Retroposon (SVA) | LINC02343 | Intron | 2 |
chr13:38 878 388 | 313 | SINE (Alu) | FREM2 | Intron | 2 |
chr13:40 955 541 | 97 | Retroposon (SVA) | ELF1 | Intron | 2 |
chr13:41 649 594 | 2 724 | Retroposon (SVA) | VWA8 | Intron | 1 |
chr13:41 881 710 | 127 | Retroposon (SVA) | VWA8 | Intron | 2 |
chr13:41 881 713 | 203 | Retroposon (SVA) | VWA8 | Intron | 2 |
chr13:43 416 199 | 448 | Retroposon (SVA) | ENOX1 | Intron | 1 |
chr13:45 485 411 | 824 | Retroposon (SVA) | COG3 | Intron | 2 |
chr13:45 693 929 | 314 | SINE (Alu) | LINC01055 | Intron | 2 |
chr13:46 470 173 | 310 | SINE (Alu) | LINC01198 | Promoter | 2 |
chr13:46 470 173 | 310 | SINE (Alu) | LINC01198 | Intron | 2 |
chr13:46 557 532 | 322 | SINE (Alu) | LRCH1 | Intron | 2 |
chr13:58 187 279 | 309 | SINE (Alu) | LINC02338 | Intron | 2 |
chr13:60 647 021 | 1 426 | LINE (L1) | LINC00378 | Intron | 2 |
chr13:60 888 200 | 6 032 | LINE (L1) | LINC00378 | Intron | 2 |
chr13:67 329 321 | 236 | SINE (Alu) | LINC00364 | Intron | 2 |
chr13:78 010 527 | 312 | SINE (Alu) | OBI1-AS1 | Intron | 2 |
chr13:78 077 535 | 315 | SINE (Alu) | OBI1-AS1 | Intron | 2 |
chr13:80 799 588 | 329 | SINE (Alu) | LOC105370278 | Intron | 2 |
chr13:80 948 934 | 331 | SINE (Alu) | LOC105370278 | Intron | 2 |
chr13:91 509 403 | 323 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:91 609 018 | 320 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:91 861 711 | 293 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:92 172 972 | 321 | SINE (Alu) | GPC5 | Intron | 2 |
chr13:93 453 549 | 318 | SINE (Alu) | GPC6 | Intron | 2 |
chr13:101 737 015 | 333 | SINE (Alu) | FGF14 | Intron | 2 |
chr13:110 424 447 | 319 | SINE (Alu) | COL4A2 | Promoter | 2 |
chr13:110 424 447 | 319 | SINE (Alu) | COL4A2 | Intron | 2 |
chr13:110 959 392 | 246 | SINE (Alu) | LOC105370364 | Intron | 2 |
chr13:112 866 638 | 312 | SINE (Alu) | ATP11A | Intron | 2 |
chr13:112 937 994 | 246 | LTR (ERV1) | MCF2L | Intron | 2 |
chr13:112 938 096 | 160 | LTR (ERV1) | MCF2L | Intron | 2 |
chr13:113 357 053 | 132 | SINE (Alu) | GRTP1-AS1 | Intron | 2 |
chr14:18 975 563 | 324 | SINE (Alu) | POTEM | Intron | 1 |
chr14:20 506 779 | 169 | Retroposon (SVA) | RNASE10 | Intron | 1 |
chr14:21 573 514 | 327 | SINE (Alu) | OR10G3 | Intron | 2 |
chr14:22 637 531 | 176 | Retroposon (SVA) | OR6J1 | Intron | 1 |
chr14:22 637 543 | 534 | Retroposon (SVA) | OR6J1 | Intron | 2 |
chr14:23 203 464 | 318 | SINE (Alu) | RNF212B | Intron | 2 |
chr14:23 975 026 | 311 | LINE (L1) | DHRS4L2 | Intron | 1 |
chr14:24 212 553 | 164 | SINE (Alu) | CHMP4A | Promoter | 2 |
chr14:24 212 553 | 164 | SINE (Alu) | CHMP4A | Coding seq. | 2 |
chr14:24 212 553 | 164 | SINE (Alu) | TM9SF1 | Intron | 2 |
chr14:24 473 726 | 118 | LTR (ERV1) | LOC101927045 | Intron | 2 |
chr14:27 832 044 | 438 | LINE (L1) | MIR3171HG | Intron | 2 |
chr14:30 681 601 | 6 122 | LINE (L1) | SCFD1 | Intron | 1 |
chr14:30 975 089 | 307 | SINE (Alu) | STRN3 | Intron | 2 |
chr14:37 890 416 | 337 | SINE (Alu) | TTC6 | Intron | 2 |
chr14:38 274 906 | 325 | SINE (Alu) | LOC112268136 | Intron | 2 |
chr14:39 405 878 | 2 984 | LINE (L1) | FBXO33 | Intron | 1 |
chr14:39 843 743 | 320 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:40 110 466 | 324 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:40 123 223 | 131 | SINE (Alu) | LOC105370462 | Intron | 2 |
chr14:50 074 336 | 997 | Retroposon (SVA) | LINC01599 | Intron | 2 |
chr14:51 252 269 | 309 | SINE (Alu) | TMX1 | Intron | 2 |
chr14:51 435 751 | 6 031 | LINE (L1) | LINC02310 | Intron | 1 |
chr14:59 352 686 | 132 | LINE (L1) | DAAM1 | Intron | 2 |
chr14:59 987 436 | 327 | SINE (Alu) | LRRC9 | Intron | 2 |
chr14:60 065 663 | 321 | SINE (Alu) | PCNX4-DT | Intron | 2 |
chr14:60 108 767 | 313 | SINE (Alu) | PCNX4 | Intron | 2 |
chr14:61 783 473 | 336 | SINE (Alu) | SNAPC1 | Intron | 2 |
chr14:64 038 285 | 387 | Retroposon (SVA) | SYNE2 | Intron | 2 |
chr14:70 397 965 | 57 | LTR (ERV1) | SYNJ2BP-COX16 | Intron | 2 |
chr14:71 013 549 | 331 | SINE (Alu) | PCNX1 | Intron | 2 |
chr14:73 353 586 | 134 | SINE (Alu) | NUMB | Intron | 2 |
chr14:73 535 549 | 1 408 | LTR (ERV1) | HEATR4 | Intron | 1 |
chr14:73 535 996 | 730 | LTR (ERV1) | HEATR4 | Intron | 1 |
chr14:73 557 102 | 311 | SINE (Alu) | HEATR4 | Intron | 2 |
chr14:73 719 827 | 317 | SINE (Alu) | MIDEAS | Intron | 2 |
chr14:75 032 863 | 321 | SINE (Alu) | MLH3 | Intron | 2 |
chr14:80 488 209 | 1 887 | LINE (L1) | CEP128 | Intron | 2 |
chr14:81 320 428 | 2 672 | Retroposon (SVA) | STON2 | Intron | 2 |
chr14:85 915 450 | 5 702 | LINE (L1) | LINC02328 | Intron | 2 |
chr14:88 530 491 | 224 | LINE (L1) | PTPN21 | Intron | 1 |
chr14:89 608 202 | 143 | SINE (Alu) | FOXN3 | Intron | 1 |
chr14:89 788 452 | 266 | SINE (Alu) | FOXN3 | Intron | 2 |
chr14:90 797 289 | 169 | SINE (Alu) | TTC7B | Intron | 2 |
chr14:91 658 708 | 321 | SINE (Alu) | CATSPERB | Intron | 2 |
chr14:93 364 579 | 314 | SINE (Alu) | UNC79 | Intron | 2 |
chr14:94 379 751 | 164 | LINE (L1) | SERPINA1 | Intron | 1 |
chr14:100 345 059 | 96 | Retroposon (SVA) | WARS1 | Intron | 1 |
chr14:102 676 499 | 166 | Retroposon (SVA) | RCOR1 | Intron | 2 |
chr15:25 490 505 | 322 | SINE (Alu) | LINC02250 | Intron | 1 |
chr15:26 627 364 | 329 | SINE (Alu) | GABRB3 | Intron | 2 |
chr15:27 520 633 | 324 | SINE (Alu) | GABRG3 | Intron | 2 |
chr15:27 929 812 | 121 | SINE (Alu) | OCA2 | Intron | 2 |
chr15:27 930 643 | 393 | LINE (L1) | OCA2 | Intron | 2 |
chr15:30 674 565 | 185 | SINE (Alu) | LOC100288637 | Intron | 1 |
chr15:30 674 704 | 181 | SINE (Alu) | LOC100288637 | Intron | 1 |
chr15:33 739 636 | 6 041 | LINE (L1) | RYR3 | Intron | 2 |
chr15:35 656 781 | 51 | Retroposon (SVA) | DPH6-DT | Intron | 2 |
chr15:35 804 106 | 309 | SINE (Alu) | DPH6-DT | Intron | 2 |
chr15:37 415 687 | 666 | LINE (L1) | LOC105370772 | Intron | 1 |
chr15:39 894 050 | 98 | Retroposon (SVA) | GPR176 | Intron | 2 |
chr15:40 422 765 | 181 | SINE (Alu) | IVD | Intron | 2 |
chr15:40 808 119 | 315 | SINE (Alu) | ZFYVE19 | Promoter | 2 |
chr15:40 808 119 | 315 | SINE (Alu) | ZFYVE19 | Intron | 2 |
chr15:41 430 004 | 305 | SINE (Alu) | RTF1 | Intron | 2 |
chr15:42 464 115 | 75 | SINE (Alu) | ZNF106 | Intron | 1 |
chr15:43 076 793 | 126 | Retroposon (SVA) | UBR1 | Intron | 2 |
chr15:45 277 715 | 312 | SINE (Alu) | SLC28A2-AS1 | Intron | 2 |
chr15:45 833 789 | 324 | SINE (Alu) | LOC105370802 | Intron | 2 |
chr15:47 279 102 | 86 | LINE (L1) | SEMA6D | Intron | 2 |
chr15:47 345 201 | 326 | SINE (Alu) | SEMA6D | Intron | 2 |
chr15:49 317 391 | 311 | SINE (Alu) | GALK2 | Intron | 2 |
chr15:60 365 043 | 306 | SINE (Alu) | ANXA2 | Intron | 2 |
chr15:60 924 332 | 317 | SINE (Alu) | RORA | Intron | 2 |
chr15:61 877 437 | 79 | LINE (L1) | VPS13C | Intron | 2 |
chr15:62 026 065 | 325 | SINE (Alu) | VPS13C | Intron | 2 |
chr15:62 793 825 | 321 | SINE (Alu) | TLN2 | Intron | 1 |
chr15:66 221 604 | 324 | SINE (Alu) | MEGF11 | Intron | 2 |
chr15:66 375 798 | 322 | SINE (Alu) | TIPIN | Intron | 2 |
chr15:66 559 923 | 200 | SINE (Alu) | LCTL | Intron | 2 |
chr15:67 002 511 | 330 | SINE (Alu) | LOC102723493 | Promoter | 2 |
chr15:67 002 511 | 330 | SINE (Alu) | LOC102723493 | Intron | 2 |
chr15:67 352 555 | 317 | SINE (Alu) | IQCH | Intron | 2 |
chr15:68 395 669 | 4 438 | LINE (L1) | ITGA11 | Intron | 2 |
chr15:70 861 401 | 313 | SINE (Alu) | LRRC49 | Intron | 2 |
chr15:71 757 533 | 133 | SINE (Alu) | THSD4 | Intron | 2 |
chr15:71 769 394 | 125 | Retroposon (SVA) | THSD4 | Intron | 2 |
chr15:72 093 735 | 80 | SINE (Alu) | MYO9A | Intron | 1 |
chr15:72 347 195 | 320 | SINE (Alu) | HEXA | Promoter | 2 |
chr15:72 347 195 | 320 | SINE (Alu) | LOC105370887 | Intron | 2 |
chr15:73 690 968 | 321 | SINE (Alu) | CD276 | Intron | 2 |
chr15:75 481 594 | 399 | Retroposon (SVA) | PTPN9 | Intron | 2 |
chr15:75 503 575 | 196 | Retroposon (SVA) | PTPN9 | Intron | 2 |
chr15:75 504 155 | 143 | Retroposon (SVA) | PTPN9 | Intron | 2 |
chr15:76 230 513 | 78 | SINE (Alu) | ETFA | Intron | 2 |
chr15:76 800 143 | 282 | SINE (Alu) | SCAPER | Intron | 2 |
chr15:78 644 312 | 317 | SINE (Alu) | CHRNB4 | Intron | 2 |
chr15:80 355 807 | 93 | SINE (Alu) | ARNT2-DT | Intron | 2 |
chr15:81 743 314 | 325 | SINE (Alu) | LOC102723985 | Intron | 2 |
chr15:87 328 661 | 153 | LINE (L1) | LOC105370956 | Intron | 1 |
chr15:87 463 033 | 159 | SINE (Alu) | LOC105370956 | Intron | 2 |
chr15:89 854 814 | 78 | Retroposon (SVA) | AP3S2 | Intron | 2 |
chr15:89 854 897 | 176 | Retroposon (SVA) | AP3S2 | Intron | 1 |
chr15:93 292 541 | 311 | SINE (Alu) | LOC105370982 | Intron | 2 |
chr15:94 276 660 | 305 | SINE (Alu) | MCTP2 | Intron | 2 |
chr15:97 226 987 | 323 | SINE (Alu) | LINC02253 | Intron | 2 |
chr15:97 270 822 | 128 | LINE (L1) | LINC02253 | Intron | 1 |
chr15:97 280 914 | 328 | SINE (Alu) | LINC02253 | Intron | 2 |
chr15:100 270 770 | 307 | SINE (Alu) | ADAMTS17 | Intron | 2 |
chr15:100 272 598 | 324 | SINE (Alu) | ADAMTS17 | Intron | 2 |
chr16:1 599 468 | 765 | Retroposon (SVA) | LOC105371046 | Intron | 2 |
chr16:3 039 305 | 319 | SINE (Alu) | MMP25-AS1 | Intron | 2 |
chr16:5 202 302 | 126 | Retroposon (SVA) | LOC105371067 | Intron | 1 |
chr16:5 295 019 | 318 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:6 743 824 | 1 405 | LINE (L1) | RBFOX1 | Intron | 1 |
chr16:7 491 379 | 308 | SINE (Alu) | RBFOX1 | Intron | 2 |
chr16:11 335 876 | 197 | Retroposon (SVA) | LOC105371082 | Intron | 1 |
chr16:11 336 035 | 318 | Retroposon (SVA) | LOC105371082 | Intron | 1 |
chr16:20 766 303 | 328 | SINE (Alu) | ACSM3 | Intron | 2 |
chr16:21 227 731 | 321 | SINE (Alu) | LOC105371123 | Intron | 2 |
chr16:21 850 493 | 183 | SINE (Alu) | NPIPB4 | Intron | 1 |
chr16:23 853 965 | 325 | SINE (Alu) | PRKCB | Intron | 2 |
chr16:24 109 280 | 441 | Retroposon (SVA) | PRKCB | Intron | 2 |
chr16:31 105 120 | 144 | Retroposon (SVA) | BCKDK | Promoter | 2 |
chr16:56 535 882 | 316 | SINE (Alu) | BBS2 | Intron | 2 |
chr16:56 739 528 | 354 | Retroposon (SVA) | NUP93 | Intron | 1 |
chr16:56 739 719 | 368 | Retroposon (SVA) | NUP93 | Promoter | 1 |
chr16:56 739 719 | 368 | Retroposon (SVA) | NUP93 | Intron | 1 |
chr16:56 739 796 | 452 | Retroposon (SVA) | NUP93 | Promoter | 1 |
chr16:56 739 796 | 452 | Retroposon (SVA) | NUP93 | Intron | 1 |
chr16:69 361 930 | 316 | SINE (Alu) | TERF2 | Promoter | 2 |
chr16:69 361 930 | 316 | SINE (Alu) | TERF2 | Intron | 2 |
chr16:69 820 416 | 53 | SINE (Alu) | WWP2 | Intron | 2 |
chr16:70 051 981 | 302 | Retroposon (SVA) | PDXDC2P-NPIPB14P | Intron | 1 |
chr16:70 167 766 | 89 | SINE (Alu) | LOC400541 | Intron | 2 |
chr16:72 695 339 | 1 626 | LINE (L1) | ZFHX3-AS1 | Intron | 2 |
chr16:75 165 104 | 307 | SINE (Alu) | ZFP1 | Intron | 2 |
chr16:78 658 928 | 326 | SINE (Alu) | WWOX | Intron | 2 |
chr16:82 131 072 | 301 | SINE (Alu) | HSD17B2-AS1 | Intron | 2 |
chr16:82 794 349 | 297 | SINE (Alu) | CDH13 | Intron | 2 |
chr16:82 878 502 | 312 | SINE (Alu) | CDH13 | Intron | 2 |
chr16:83 632 754 | 330 | SINE (Alu) | CDH13 | Intron | 2 |
chr16:84 226 714 | 336 | SINE (Alu) | KCNG4 | Intron | 2 |
chr16:86 278 757 | 176 | LTR (ERV1) | LINC01081 | Intron | 2 |
chr16:88 462 841 | 337 | SINE (Alu) | ZFPM1 | Intron | 1 |
chr16:89 224 969 | 321 | SINE (Alu) | ZNF778 | Intron | 2 |
chr16:89 617 674 | 306 | SINE (Alu) | DPEP1 | Intron | 2 |
chr17:2 448 181 | 125 | Retroposon (SVA) | METTL16 | Intron | 2 |
chr17:3 544 256 | 265 | SINE (Alu) | TRPV3 | Intron | 2 |
chr17:6 007 808 | 312 | SINE (Alu) | WSCD1 | Intron | 2 |
chr17:11 972 698 | 59 | LTR (ERV1) | ZNF18 | Intron | 2 |
chr17:13 533 513 | 297 | SINE (Alu) | HS3ST3A1 | Intron | 1 |
chr17:16 095 665 | 101 | Retroposon (SVA) | NCOR1 | Intron | 2 |
chr17:16 330 605 | 317 | SINE (Alu) | PIGL | Intron | 2 |
chr17:16 699 504 | 133 | SINE (Alu) | CCDC144A | Intron | 2 |
chr17:19 627 838 | 747 | Retroposon (SVA) | SLC47A1P2 | Intron | 2 |
chr17:20 038 319 | 2 668 | Retroposon (SVA) | SPECC1 | Intron | 1 |
chr17:20 985 221 | 97 | Retroposon (SVA) | LOC339260 | Intron | 1 |
chr17:21 292 724 | 121 | SINE (Alu) | MAP2K3 | Intron | 2 |
chr17:28 456 137 | 1 154 | Retroposon (SVA) | RSKR | Intron | 1 |
chr17:28 604 080 | 96 | Retroposon (SVA) | SPAG5-AS1 | Intron | 2 |
chr17:30 071 289 | 1 216 | LINE (L1) | EFCAB5 | Intron | 2 |
chr17:31 515 455 | 317 | SINE (Alu) | RAB11FIP4 | Intron | 2 |
chr17:32 566 829 | 309 | SINE (Alu) | MYO1D | Intron | 2 |
chr17:42 106 634 | 105 | SINE (Alu) | DHX58 | Intron | 2 |
chr17:42 973 234 | 271 | Retroposon (SVA) | PTGES3L-AARSD1 | Intron | 2 |
chr17:44 181 118 | 253 | Retroposon (SVA) | ASB16-AS1 | Intron | 2 |
chr17:46 210 498 | 68 | LINE (CR1) | KANSL1 | Intron | 2 |
chr17:47 325 027 | 264 | SINE (Alu) | ITGB3 | Intron | 2 |
chr17:48 427 626 | 323 | SINE (Alu) | SKAP1 | Intron | 2 |
chr17:51 452 022 | 301 | SINE (Alu) | LINC02072 | Intron | 2 |
chr17:51 972 365 | 314 | SINE (Alu) | CA10 | Intron | 2 |
chr17:53 879 756 | 321 | SINE (Alu) | LOC107985001 | Intron | 2 |
chr17:56 870 207 | 295 | SINE (Alu) | TRIM25 | Intron | 2 |
chr17:62 729 922 | 131 | SINE (Alu) | LOC105371855 | Intron | 2 |
chr17:62 996 973 | 189 | SINE (Alu) | TANC2 | Intron | 2 |
chr17:63 654 314 | 314 | SINE (Alu) | MAP3K3 | Intron | 2 |
chr17:72 701 861 | 139 | SINE (Alu) | SLC39A11 | Intron | 2 |
chr17:73 408 051 | 163 | SINE (Alu) | SDK2 | Intron | 2 |
chr17:73 408 217 | 165 | SINE (Alu) | SDK2 | Intron | 2 |
chr17:74 624 066 | 307 | SINE (Alu) | CD300E | Promoter | 2 |
chr17:76 378 385 | 334 | SINE (Alu) | SPHK1 | Intron | 2 |
chr17:78 156 966 | 318 | SINE (Alu) | C17orf99 | Intron | 2 |
chr17:81 146 946 | 326 | SINE (Alu) | AATK | Intron | 2 |
chr17:82 631 588 | 304 | SINE (Alu) | WDR45B | Intron | 1 |
chr17:82 802 100 | 1 409 | Retroposon (SVA) | TBCD | Intron | 2 |
chr17:362 100 | 159 | LTR (ERV1) | RPH3AL | Intron | 2 |
chr17:572 389 | 96 | Retroposon (SVA) | VPS53 | Intron | 2 |
chr17:598 863 | 289 | Retroposon (SVA) | VPS53 | Intron | 1 |
chr17:598 881 | 415 | Retroposon (SVA) | VPS53 | Intron | 2 |
chr17:831 916 | 313 | SINE (Alu) | NXN | Intron | 2 |
chr18:1 235 775 | 322 | SINE (Alu) | LOC105371953 | Intron | 2 |
chr18:1 803 867 | 136 | SINE (Alu) | LOC105371959 | Intron | 2 |
chr18:10 911 126 | 317 | SINE (Alu) | PIEZO2 | Intron | 1 |
chr18:11 489 186 | 412 | SINE (Alu) | LINC01255 | Promoter | 1 |
chr18:11 489 186 | 412 | SINE (Alu) | LINC01255 | Intron | 1 |
chr18:23 577 376 | 157 | LTR (ERV1) | NPC1 | Promoter | 2 |
chr18:23 577 376 | 157 | LTR (ERV1) | NPC1 | Intron | 2 |
chr18:26 958 048 | 317 | SINE (Alu) | AQP4-AS1 | Intron | 2 |
chr18:30 411 556 | 324 | SINE (Alu) | LOC105372046 | Intron | 2 |
chr18:49 203 087 | 1 030 | Retroposon (SVA) | DYM | Intron | 2 |
chr18:52 405 374 | 321 | SINE (Alu) | DCC | Intron | 2 |
chr18:53 460 168 | 320 | SINE (Alu) | DCC | Intron | 2 |
chr18:55 478 829 | 319 | SINE (Alu) | MIR4529 | Promoter | 2 |
chr18:55 478 829 | 319 | SINE (Alu) | TCF4-AS1 | Intron | 2 |
chr18:56 689 827 | 330 | SINE (Alu) | WDR7 | Intron | 2 |
chr18:57 633 003 | 450 | Retroposon (SVA) | ATP8B1-AS1 | Intron | 1 |
chr18:57 642 316 | 306 | LTR (ERV1) | ATP8B1-AS1 | Intron | 1 |
chr18:57 713 755 | 143 | SINE (Alu) | LOC105372141 | Intron | 2 |
chr18:62 046 485 | 314 | SINE (Alu) | PIGN | Intron | 2 |
chr18:65 820 032 | 316 | SINE (Alu) | CDH7 | Intron | 2 |
chr18:68 731 923 | 314 | SINE (Alu) | CCDC102B | Intron | 2 |
chr18:68 905 254 | 332 | SINE (Alu) | CCDC102B | Intron | 2 |
chr18:69 492 815 | 313 | SINE (Alu) | DOK6 | Intron | 2 |
chr18:74 269 361 | 63 | LINE (L2) | CYB5A | Intron | 1 |
chr18:76 241 967 | 322 | SINE (Alu) | LOC105372209 | Intron | 2 |
chr19:2 025 044 | 311 | SINE (Alu) | LOC107985278 | Intron | 2 |
chr19:2 383 641 | 307 | SINE (Alu) | TMPRSS9 | Intron | 2 |
chr19:2 559 735 | 124 | SINE (Alu) | GNG7 | Intron | 2 |
chr19:3 287 350 | 317 | SINE (Alu) | CELF5 | Intron | 2 |
chr19:5 761 462 | 154 | LTR (ERVL) | CATSPERD | Intron | 1 |
chr19:6 923 838 | 321 | SINE (Alu) | ADGRE1 | Intron | 1 |
chr19:7 739 124 | 314 | SINE (Alu) | CLEC4G | Intron | 2 |
chr19:8 896 255 | 305 | SINE (Alu) | MUC16 | Promoter | 1 |
chr19:8 896 255 | 305 | SINE (Alu) | MUC16 | Intron | 1 |
chr19:12 621 723 | 128 | Retroposon (SVA) | ZNF791 | Intron | 2 |
chr19:15 474 055 | 129 | LINE (L1) | PGLYRP2 | Intron | 2 |
chr19:17 722 277 | 166 | SINE (Alu) | MAP1S | Intron | 1 |
chr19:20 137 884 | 76 | Retroposon (SVA) | LOC105372310 | Intron | 2 |
chr19:20 149 581 | 147 | Retroposon (SVA) | LOC105372310 | Intron | 2 |
chr19:20 149 986 | 125 | Retroposon (SVA) | LOC105372310 | Intron | 2 |
chr19:20 214 656 | 49 | Retroposon (SVA) | LOC105372310 | Intron | 1 |
chr19:20 563 165 | 314 | SINE (Alu) | LOC105372316 | Intron | 2 |
chr19:21 577 499 | 318 | SINE (Alu) | LOC101929007 | Intron | 2 |
chr19:21 577 658 | 146 | SINE (Alu) | LOC101929007 | Intron | 1 |
chr19:22 634 027 | 314 | SINE (Alu) | ZNF492 | Promoter | 2 |
chr19:22 636 885 | 308 | SINE (Alu) | ZNF492 | Intron | 1 |
chr19:23 768 604 | 313 | SINE (Alu) | RPSAP58 | Intron | 2 |
chr19:23 828 484 | 1 550 | Retroposon (SVA) | RPSAP58 | Intron | 2 |
chr19:23 845 118 | 2 395 | Retroposon (SVA) | RPSAP58 | Intron | 2 |
chr19:29 364 872 | 963 | LTR (ERVK) | VSTM2B-DT | Intron | 2 |
chr19:29 957 290 | 304 | SINE (Alu) | URI1 | Intron | 2 |
chr19:31 199 763 | 352 | SINE (Alu) | LINC01791 | Intron | 2 |
chr19:36 222 836 | 2 484 | Retroposon (SVA) | ZNF146 | Intron | 2 |
chr19:38 269 830 | 115 | SINE (Alu) | SPINT2 | Intron | 1 |
chr19:39 905 477 | 312 | SINE (Alu) | FCGBP | Intron | 2 |
chr19:43 656 240 | 317 | SINE (Alu) | PLAUR | Intron | 2 |
chr19:45 010 312 | 319 | SINE (Alu) | RELB | Intron | 2 |
chr19:46 509 014 | 307 | SINE (Alu) | PPP5D1P | Intron | 2 |
chr19:51 357 374 | 327 | SINE (Alu) | ETFB | Promoter | 2 |
chr19:51 357 374 | 327 | SINE (Alu) | ETFB | Intron | 2 |
chr19:52 720 518 | 73 | Retroposon (SVA) | ZNF611 | Intron | 1 |
chr19:53 391 192 | 356 | LTR (ERV1) | ZNF525 | Intron | 1 |
chr19:54 753 609 | 315 | SINE (Alu) | KIR2DL1 | Intron | 1 |
chr19:54 999 025 | 49 | Retroposon (SVA) | NLRP2 | Intron | 1 |
chr19:54 999 030 | 49 | Retroposon (SVA) | NLRP2 | Intron | 1 |
chr19:55 064 841 | 306 | SINE (Alu) | RDH13 | Promoter | 2 |
chr19:55 064 841 | 306 | SINE (Alu) | RDH13 | Intron | 2 |
chr19:56 454 674 | 314 | SINE (Alu) | ZNF667 | Intron | 2 |
chr19:56 512 195 | 325 | SINE (Alu) | ZNF471 | Intron | 2 |
chr20:1 072 449 | 99 | LINE (L1) | LOC105372493 | Intron | 2 |
chr20:1 149 892 | 155 | SINE (Alu) | PSMF1 | Intron | 2 |
chr20:1 602 896 | 183 | LTR (ERVL) | SIRPB1 | Intron | 2 |
chr20:3 261 761 | 309 | SINE (Alu) | DNAAF9 | Intron | 2 |
chr20:8 462 821 | 330 | SINE (Alu) | PLCB1 | Intron | 2 |
chr20:8 689 955 | 303 | SINE (Alu) | PLCB1 | Intron | 2 |
chr20:11 300 930 | 126 | LINE (L1) | LOC339593 | Intron | 2 |
chr20:13 723 497 | 308 | SINE (Alu) | ESF1 | Intron | 2 |
chr20:15 125 949 | 290 | SINE (Alu) | MACROD2 | Intron | 2 |
chr20:16 498 848 | 324 | LINE (L1) | KIF16B | Intron | 2 |
chr20:18 689 890 | 175 | SINE (Alu) | DTD1 | Intron | 2 |
chr20:25 562 197 | 445 | Retroposon (SVA) | NINL | Intron | 2 |
chr20:35 213 917 | 180 | SINE (Alu) | PROCR | Intron | 2 |
chr20:35 564 371 | 148 | SINE (Alu) | FER1L4 | Intron | 2 |
chr20:47 525 884 | 146 | Retroposon (SVA) | NCOA3 | Intron | 2 |
chr20:50 685 661 | 315 | SINE (Alu) | RIPOR3 | Intron | 2 |
chr20:60 439 013 | 75 | LINE (L1) | MIR646HG | Intron | 1 |
chr20:60 600 152 | 75 | LTR (ERVL) | MIR646HG | Intron | 2 |
chr21:8 416 922 | 189 | LTR (ERV1) | LOC105379507 | Intron | 1 |
chr21:9 333 707 | 124 | LTR (ERV1) | LOC101930100 | Intron | 2 |
chr21:9 348 228 | 71 | LINE (L1) | LOC101930100 | Intron | 2 |
chr21:10 508 068 | 56 | LINE (L1) | BAGE2 | Intron | 2 |
chr21:13 042 671 | 317 | SINE (Alu) | ANKRD30BP2 | Promoter | 2 |
chr21:13 042 671 | 317 | SINE (Alu) | ANKRD30BP2 | Intron | 2 |
chr21:14 282 956 | 326 | SINE (Alu) | ABCC13 | Intron | 2 |
chr21:14 980 612 | 328 | SINE (Alu) | LINC02246 | Intron | 2 |
chr21:15 556 506 | 389 | LINE (L1) | LOC101927745 | Intron | 2 |
chr21:16 398 242 | 93 | LTR (ERV1) | MIR99AHG | Intron | 2 |
chr21:18 144 980 | 3 401 | LINE (L1) | CHODL | Intron | 2 |
chr21:22 253 869 | 6 639 | LINE (L1) | LOC107985508 | Intron | 2 |
chr21:24 981 909 | 326 | SINE (Alu) | LINC01692 | Intron | 2 |
chr21:27 385 451 | 316 | SINE (Alu) | LOC105372762 | Intron | 2 |
chr21:29 011 596 | 47 | Retroposon (SVA) | RWDD2B | Intron | 1 |
chr21:32 433 901 | 139 | SINE (Alu) | EVA1C | Intron | 2 |
chr21:32 482 930 | 67 | SINE (Alu) | EVA1C | Intron | 2 |
chr21:35 865 628 | 327 | SINE (Alu) | LOC101928269 | Intron | 2 |
chr21:35 948 784 | 317 | SINE (Alu) | LOC101928269 | Intron | 2 |
chr21:37 685 537 | 314 | SINE (Alu) | KCNJ6 | Intron | 2 |
chr21:40 080 124 | 326 | SINE (Alu) | DSCAM | Intron | 2 |
chr21:42 778 571 | 96 | Retroposon (SVA) | LINC01668 | Intron | 2 |
chr21:42 921 739 | 54 | LTR (ERV1) | ERVH48-1 | Intron | 2 |
chr21:45 622 445 | 326 | SINE (Alu) | LOC107985485 | Intron | 2 |
chr22:11 849 283 | 125 | LTR (ERV1) | LOC107984037 | Intron | 2 |
chr22:11 860 399 | 308 | SINE (Alu) | LOC107984037 | Intron | 2 |
chr22:17 224 399 | 326 | SINE (Alu) | ADA2 | Intron | 2 |
chr22:17 567 653 | 356 | SINE (Alu) | SLC25A18 | Intron | 2 |
chr22:18 028 745 | 327 | SINE (Alu) | LINC01634 | Promoter | 2 |
chr22:18 106 942 | 189 | LTR (ERVL) | TUBA8 | Intron | 1 |
chr22:18 422 718 | 62 | SINE (Alu) | FAM230A | Intron | 1 |
chr22:18 801 820 | 134 | SINE (Alu) | GGT3P | Intron | 2 |
chr22:19 373 921 | 127 | SINE (Alu) | HIRA | Intron | 2 |
chr22:20 521 093 | 296 | SINE (Alu) | MED15 | Intron | 2 |
chr22:24 000 540 | 315 | SINE (Alu) | GSTT4 | Intron | 2 |
chr22:24 985 104 | 337 | SINE (Alu) | KIAA1671 | Intron | 1 |
chr22:25 071 581 | 98 | SINE (Alu) | KIAA1671 | Intron | 2 |
chr22:26 601 644 | 317 | SINE (Alu) | CRYBA4 | Intron | 2 |
chr22:26 773 140 | 875 | Retroposon (SVA) | MIATNB | Intron | 2 |
chr22:28 380 048 | 330 | SINE (Alu) | TTC28 | Intron | 2 |
chr22:30 597 422 | 159 | LTR (ERV1) | PES1 | Intron | 2 |
chr22:33 132 511 | 316 | SINE (Alu) | LINC01640 | Intron | 2 |
chr22:34 034 608 | 326 | SINE (Alu) | LINC01643 | Intron | 2 |
chr22:34 784 743 | 321 | SINE (Alu) | LINC02885 | Intron | 2 |
chr22:36 315 825 | 321 | SINE (Alu) | MYH9 | Intron | 2 |
chr22:40 501 160 | 128 | Retroposon (SVA) | MRTFA | Intron | 2 |
chr22:40 537 228 | 98 | Retroposon (SVA) | MRTFA | Intron | 1 |
chr22:40 537 872 | 309 | Retroposon (SVA) | MRTFA | Intron | 1 |
chr22:41 314 923 | 312 | SINE (Alu) | ZC3H7B | Intron | 2 |
chr22:41 835 230 | 134 | SINE (Alu) | SREBF2-AS1 | Promoter | 1 |
chr22:41 835 230 | 134 | SINE (Alu) | SREBF2 | Intron | 1 |
chr22:42 818 815 | 314 | SINE (Alu) | ARFGAP3 | Intron | 1 |
chr22:43 928 708 | 1 144 | LINE (L1) | PNPLA3 | Intron | 2 |
chr22:49 879 747 | 216 | SINE (Alu) | ZBED4 | Intron | 2 |
chrX:1 270 912 | 178 | SINE (Alu) | CSF2RA | Intron | 2 |
chrX:1 304 189 | 333 | SINE (Alu) | CSF2RA | Intron | 2 |
chrX:1 390 760 | 118 | SINE (Alu) | SLC25A6 | Intron | 2 |
chrX:1 496 843 | 136 | SINE (Alu) | P2RY8 | Intron | 2 |
chrX:14 899 113 | 326 | SINE (Alu) | MOSPD2 | Intron | 2 |
chrX:16 964 930 | 125 | Retroposon (SVA) | REPS2 | Intron | 2 |
chrX:22 346 956 | 320 | SINE (Alu) | PHEX | Intron | 1 |
chrX:24 709 090 | 129 | Retroposon (SVA) | POLA1 | Intron | 2 |
chrX:31 257 187 | 302 | SINE (Alu) | DMD | Intron | 1 |
chrX:31 982 954 | 315 | SINE (Alu) | DMD | Intron | 2 |
chrX:33 284 732 | 306 | SINE (Alu) | DMD | Intron | 2 |
chrX:34 249 205 | 394 | LINE (L1) | LOC105373153 | Intron | 2 |
chrX:45 040 275 | 164 | Retroposon (SVA) | KDM6A | Intron | 2 |
chrX:65 457 302 | 345 | Retroposon (SVA) | ZC3H12B | Intron | 2 |
chrX:68 326 735 | 298 | Retroposon (SVA) | OPHN1 | Intron | 1 |
chrX:68 326 866 | 461 | Retroposon (SVA) | OPHN1 | Intron | 1 |
chrX:70 350 008 | 115 | Retroposon (SVA) | KIF4A | Intron | 2 |
chrX:72 681 896 | 227 | Retroposon (SVA) | PHKA1 | Intron | 1 |
chrX:80 396 894 | 832 | Retroposon (SVA) | TENT5D | Intron | 2 |
chrX:84 080 389 | 1 360 | LINE (L1) | RPS6KA6 | Intron | 2 |
chrX:92 170 920 | 135 | SINE (Alu) | PCDH11X | Intron | 2 |
chrX:100 972 832 | 764 | Retroposon (SVA) | ARL13A | Intron | 2 |
chrX:107 501 516 | 133 | SINE (Alu) | FRMPD3 | Intron | 2 |
chrX:118 888 886 | 66 | LTR (ERV1) | LINC01285 | Intron | 1 |
chrX:122 435 457 | 327 | SINE (Alu) | LOC101928359 | Intron | 2 |
chrX:124 128 744 | 223 | Retroposon (SVA) | STAG2 | Intron | 2 |
chrX:128 450 734 | 54 | LTR (ERVL) | LOC107985698 | Intron | 2 |
chrX:131 467 165 | 77 | LINE (L1) | IGSF1 | Intron | 2 |
chrX:147 231 728 | 106 | LINE (L1) | MIR506 | Promoter | 1 |
chrX:147 231 728 | 106 | LINE (L1) | LOC105373347 | Intron | 1 |
chrX:147 992 468 | 777 | Retroposon (SVA) | FMR1NB | Intron | 2 |
chrX:366 401 | 161 | SINE (Alu) | PPP2R3B | Intron | 1 |
chrX:366 814 | 163 | SINE (Alu) | PPP2R3B | Intron | 1 |
Position | Length | Type | Gene | Annotation | Occurrences |
|---|---|---|---|---|---|
chr1:168 957 876 | 106 | DNA (hAT) | DPT | Intron | 2 |
chr1:240 512 503 | 176 | DNA (hAT) | GREM2 | Intron | 2 |
chr3:10 655 431 | 82 | DNA (hAT) | ATP2B2 | Intron | 1 |
chr3:197 847 677 | 56 | DNA (TcMar) | LRCH3 | Promoter | 2 |
chr3:197 847 677 | 56 | DNA (TcMar) | LRCH3 | Intron | 2 |
chr6:106 384 889 | 69 | DNA (hAT) | CRYBG1 | Intron | 1 |
chr11:13 001 659 | 82 | DNA (hAT) | RASSF10-DT | Intron | 2 |
chr11:41 072 280 | 87 | DNA (TcMar) | LRRC4C | Intron | 2 |
It is common to find deletions whose coordinates match those of a TE sequence in the reference genome. This section presents them.
Allele frequency is shown for TE deletions for each chromosome. Each dot marks a different deletion.
This section shows the result of enrichment analysis on the genes affected with TE insertions.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is Pyrin domain binding (2.674514e-10), and the highest (among the lowest 10) is oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (0.01091141). The ratio is 40797726.95, i.e., they differ in 7 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0032090 | Pyrin domain binding | 10/924 | 11/20758 | 3.078e-13 | 2.675e-10 | 2.452e-10 | 10 | 0.01082 |
GO:0052650 | NADP-retinol dehydrogenase activity | 10/924 | 24/20758 | 3.229e-08 | 1.403e-05 | 1.287e-05 | 10 | 0.01082 |
GO:0004033 | aldo-keto reductase (NADP) activity | 11/924 | 41/20758 | 1.185e-06 | 0.0003125 | 0.0002865 | 11 | 0.0119 |
GO:0008106 | alcohol dehydrogenase (NADP+) activity | 10/924 | 34/20758 | 1.438e-06 | 0.0003125 | 0.0002865 | 10 | 0.01082 |
GO:0005096 | GTPase activator activity | 33/924 | 304/20758 | 2.282e-06 | 0.0003967 | 0.0003637 | 33 | 0.03571 |
GO:0032395 | MHC class II receptor activity | 13/924 | 67/20758 | 6.734e-06 | 0.0009753 | 0.0008943 | 13 | 0.01407 |
GO:0042609 | CD4 receptor binding | 6/924 | 13/20758 | 1.003e-05 | 0.001246 | 0.001142 | 6 | 0.006494 |
GO:0046703 | natural killer cell lectin-like receptor binding | 8/924 | 27/20758 | 1.559e-05 | 0.001693 | 0.001553 | 8 | 0.008658 |
GO:0023026 | MHC class II protein complex binding | 15/924 | 109/20758 | 9.687e-05 | 0.009353 | 0.008576 | 15 | 0.01623 |
GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 18/924 | 150/20758 | 0.0001256 | 0.01091 | 0.01001 | 18 | 0.01948 |
GO:0022836 | gated channel activity | 33/924 | 372/20758 | 0.0001398 | 0.01104 | 0.01012 | 33 | 0.03571 |
GO:0003779 | actin binding | 38/924 | 471/20758 | 0.0003172 | 0.0221 | 0.02027 | 38 | 0.04113 |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | 18/924 | 162/20758 | 0.0003307 | 0.0221 | 0.02027 | 18 | 0.01948 |
GO:0005216 | ion channel activity | 38/924 | 480/20758 | 0.0004578 | 0.02646 | 0.02427 | 38 | 0.04113 |
GO:0005516 | calmodulin binding | 21/924 | 210/20758 | 0.0004688 | 0.02646 | 0.02427 | 21 | 0.02273 |
GO:0023023 | MHC protein complex binding | 15/924 | 126/20758 | 0.0004873 | 0.02646 | 0.02427 | 15 | 0.01623 |
GO:0005085 | guanyl-nucleotide exchange factor activity | 23/924 | 245/20758 | 0.0006315 | 0.03228 | 0.0296 | 23 | 0.02489 |
GO:0015020 | glucuronosyltransferase activity | 7/924 | 36/20758 | 0.0009107 | 0.04397 | 0.04032 | 7 | 0.007576 |
GO:0005200 | structural constituent of cytoskeleton | 14/924 | 121/20758 | 0.0009852 | 0.04506 | 0.04132 | 14 | 0.01515 |
GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity | 5/924 | 19/20758 | 0.001193 | 0.04935 | 0.04525 | 5 | 0.005411 |
GO:0004890 | GABA-A receptor activity | 5/924 | 19/20758 | 0.001193 | 0.04935 | 0.04525 | 5 | 0.005411 |
GO:0030247 | polysaccharide binding | 7/924 | 38/20758 | 0.001274 | 0.05034 | 0.04616 | 7 | 0.007576 |
GO:0042605 | peptide antigen binding | 15/924 | 139/20758 | 0.001356 | 0.05123 | 0.04698 | 15 | 0.01623 |
GO:0050811 | GABA receptor binding | 5/924 | 20/20758 | 0.001532 | 0.05548 | 0.05087 | 5 | 0.005411 |
GO:0005253 | anion channel activity | 12/924 | 101/20758 | 0.001759 | 0.06116 | 0.05608 | 12 | 0.01299 |
GO:0005001 | transmembrane receptor protein tyrosine phosphatase activity | 5/924 | 21/20758 | 0.001938 | 0.06238 | 0.0572 | 5 | 0.005411 |
GO:0019198 | transmembrane receptor protein phosphatase activity | 5/924 | 21/20758 | 0.001938 | 0.06238 | 0.0572 | 5 | 0.005411 |
GO:0022851 | GABA-gated chloride ion channel activity | 4/924 | 13/20758 | 0.00202 | 0.06268 | 0.05748 | 4 | 0.004329 |
GO:0003774 | cytoskeletal motor activity | 13/924 | 118/20758 | 0.002297 | 0.06882 | 0.06311 | 13 | 0.01407 |
GO:0031681 | G-protein beta-subunit binding | 5/924 | 22/20758 | 0.002417 | 0.07002 | 0.06421 | 5 | 0.005411 |
GO:0070679 | inositol 1,4,5 trisphosphate binding | 4/924 | 14/20758 | 0.002729 | 0.07649 | 0.07014 | 4 | 0.004329 |
GO:0042578 | phosphoric ester hydrolase activity | 30/924 | 396/20758 | 0.003351 | 0.091 | 0.08344 | 30 | 0.03247 |
GO:0015036 | disulfide oxidoreductase activity | 7/924 | 46/20758 | 0.003973 | 0.1046 | 0.09592 | 7 | 0.007576 |
GO:0042608 | T cell receptor binding | 6/924 | 35/20758 | 0.004107 | 0.105 | 0.09625 | 6 | 0.006494 |
GO:0015085 | calcium ion transmembrane transporter activity | 14/924 | 142/20758 | 0.004436 | 0.1101 | 0.101 | 14 | 0.01515 |
GO:0022839 | ion gated channel activity | 7/924 | 48/20758 | 0.005061 | 0.1192 | 0.1093 | 7 | 0.007576 |
GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | 5/924 | 26/20758 | 0.005212 | 0.1192 | 0.1093 | 5 | 0.005411 |
GO:0008266 | poly(U) RNA binding | 5/924 | 26/20758 | 0.005212 | 0.1192 | 0.1093 | 5 | 0.005411 |
GO:0005254 | chloride channel activity | 10/924 | 88/20758 | 0.00568 | 0.1266 | 0.1161 | 10 | 0.01082 |
GO:1904315 | transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential | 8/924 | 62/20758 | 0.006013 | 0.1306 | 0.1198 | 8 | 0.008658 |
GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | 8/924 | 63/20758 | 0.006625 | 0.1404 | 0.1288 | 8 | 0.008658 |
GO:0004112 | cyclic-nucleotide phosphodiesterase activity | 5/924 | 28/20758 | 0.007236 | 0.1446 | 0.1326 | 5 | 0.005411 |
GO:0016917 | GABA receptor activity | 5/924 | 28/20758 | 0.007236 | 0.1446 | 0.1326 | 5 | 0.005411 |
GO:0031267 | small GTPase binding | 23/924 | 297/20758 | 0.007324 | 0.1446 | 0.1326 | 23 | 0.02489 |
GO:0051117 | ATPase binding | 10/924 | 92/20758 | 0.007747 | 0.1465 | 0.1343 | 10 | 0.01082 |
GO:0015276 | ligand-gated ion channel activity | 14/924 | 152/20758 | 0.008023 | 0.1465 | 0.1343 | 14 | 0.01515 |
GO:0022834 | ligand-gated channel activity | 14/924 | 152/20758 | 0.008023 | 0.1465 | 0.1343 | 14 | 0.01515 |
GO:0004791 | thioredoxin-disulfide reductase activity | 3/924 | 10/20758 | 0.008339 | 0.1465 | 0.1343 | 3 | 0.003247 |
GO:0008187 | poly-pyrimidine tract binding | 5/924 | 29/20758 | 0.00843 | 0.1465 | 0.1343 | 5 | 0.005411 |
GO:0045499 | chemorepellent activity | 5/924 | 29/20758 | 0.00843 | 0.1465 | 0.1343 | 5 | 0.005411 |
GO:0008569 | minus-end-directed microtubule motor activity | 4/924 | 19/20758 | 0.008851 | 0.1479 | 0.1356 | 4 | 0.004329 |
GO:0099095 | ligand-gated anion channel activity | 4/924 | 19/20758 | 0.008851 | 0.1479 | 0.1356 | 4 | 0.004329 |
GO:0008081 | phosphoric diester hydrolase activity | 10/924 | 95/20758 | 0.009645 | 0.1569 | 0.1439 | 10 | 0.01082 |
GO:0070717 | poly-purine tract binding | 5/924 | 30/20758 | 0.009753 | 0.1569 | 0.1439 | 5 | 0.005411 |
GO:0008194 | UDP-glycosyltransferase activity | 14/924 | 157/20758 | 0.01052 | 0.1616 | 0.1482 | 14 | 0.01515 |
GO:0005262 | calcium channel activity | 12/924 | 126/20758 | 0.01053 | 0.1616 | 0.1482 | 12 | 0.01299 |
GO:0015297 | antiporter activity | 10/924 | 97/20758 | 0.01109 | 0.1616 | 0.1482 | 10 | 0.01082 |
GO:0015103 | inorganic anion transmembrane transporter activity | 15/924 | 174/20758 | 0.01112 | 0.1616 | 0.1482 | 15 | 0.01623 |
GO:0004725 | protein tyrosine phosphatase activity | 11/924 | 112/20758 | 0.01126 | 0.1616 | 0.1482 | 11 | 0.0119 |
GO:0022824 | transmitter-gated ion channel activity | 8/924 | 69/20758 | 0.01134 | 0.1616 | 0.1482 | 8 | 0.008658 |
GO:0022835 | transmitter-gated channel activity | 8/924 | 69/20758 | 0.01134 | 0.1616 | 0.1482 | 8 | 0.008658 |
GO:0033038 | bitter taste receptor activity | 6/924 | 44/20758 | 0.01274 | 0.1786 | 0.1638 | 6 | 0.006494 |
GO:0099529 | neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential | 8/924 | 71/20758 | 0.01336 | 0.1808 | 0.1657 | 8 | 0.008658 |
GO:0005080 | protein kinase C binding | 7/924 | 58/20758 | 0.01411 | 0.1808 | 0.1657 | 7 | 0.007576 |
GO:0015298 | solute:cation antiporter activity | 6/924 | 45/20758 | 0.01417 | 0.1808 | 0.1657 | 6 | 0.006494 |
GO:0004090 | carbonyl reductase (NADPH) activity | 3/924 | 12/20758 | 0.0143 | 0.1808 | 0.1657 | 3 | 0.003247 |
GO:0008331 | high voltage-gated calcium channel activity | 3/924 | 12/20758 | 0.0143 | 0.1808 | 0.1657 | 3 | 0.003247 |
GO:0003777 | microtubule motor activity | 8/924 | 72/20758 | 0.01446 | 0.1808 | 0.1657 | 8 | 0.008658 |
GO:0005451 | monovalent cation:proton antiporter activity | 5/924 | 33/20758 | 0.01456 | 0.1808 | 0.1657 | 5 | 0.005411 |
GO:0015299 | solute:proton antiporter activity | 5/924 | 33/20758 | 0.01456 | 0.1808 | 0.1657 | 5 | 0.005411 |
GO:0005229 | intracellular calcium activated chloride channel activity | 4/924 | 22/20758 | 0.01503 | 0.1814 | 0.1664 | 4 | 0.004329 |
GO:0061778 | intracellular chloride channel activity | 4/924 | 22/20758 | 0.01503 | 0.1814 | 0.1664 | 4 | 0.004329 |
GO:0005245 | voltage-gated calcium channel activity | 6/924 | 46/20758 | 0.01569 | 0.1868 | 0.1713 | 6 | 0.006494 |
GO:0005231 | excitatory extracellular ligand-gated ion channel activity | 7/924 | 60/20758 | 0.01681 | 0.197 | 0.1807 | 7 | 0.007576 |
GO:0015108 | chloride transmembrane transporter activity | 11/924 | 119/20758 | 0.01714 | 0.197 | 0.1807 | 11 | 0.0119 |
GO:0030020 | extracellular matrix structural constituent conferring tensile strength | 6/924 | 47/20758 | 0.01733 | 0.197 | 0.1807 | 6 | 0.006494 |
GO:0050660 | flavin adenine dinucleotide binding | 9/924 | 89/20758 | 0.01746 | 0.197 | 0.1807 | 9 | 0.00974 |
GO:0031994 | insulin-like growth factor I binding | 3/924 | 13/20758 | 0.01799 | 0.1979 | 0.1815 | 3 | 0.003247 |
GO:0047134 | protein-disulfide reductase (NAD(P)) activity | 3/924 | 13/20758 | 0.01799 | 0.1979 | 0.1815 | 3 | 0.003247 |
GO:0008143 | poly(A) binding | 4/924 | 24/20758 | 0.02036 | 0.2184 | 0.2003 | 4 | 0.004329 |
GO:0030215 | semaphorin receptor binding | 4/924 | 24/20758 | 0.02036 | 0.2184 | 0.2003 | 4 | 0.004329 |
GO:0005161 | platelet-derived growth factor receptor binding | 3/924 | 14/20758 | 0.02215 | 0.2313 | 0.2121 | 3 | 0.003247 |
GO:0051020 | GTPase binding | 23/924 | 329/20758 | 0.02237 | 0.2313 | 0.2121 | 23 | 0.02489 |
GO:0005230 | extracellular ligand-gated ion channel activity | 8/924 | 78/20758 | 0.0225 | 0.2313 | 0.2121 | 8 | 0.008658 |
GO:0043178 | alcohol binding | 9/924 | 93/20758 | 0.02262 | 0.2313 | 0.2121 | 9 | 0.00974 |
GO:0008527 | taste receptor activity | 6/924 | 50/20758 | 0.02295 | 0.2319 | 0.2126 | 6 | 0.006494 |
GO:0098631 | cell adhesion mediator activity | 7/924 | 64/20758 | 0.02324 | 0.2321 | 0.2128 | 7 | 0.007576 |
GO:0008509 | anion transmembrane transporter activity | 23/924 | 331/20758 | 0.0238 | 0.235 | 0.2155 | 23 | 0.02489 |
GO:0016758 | hexosyltransferase activity | 16/924 | 210/20758 | 0.02592 | 0.253 | 0.232 | 16 | 0.01732 |
GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | 3/924 | 15/20758 | 0.02679 | 0.2551 | 0.2339 | 3 | 0.003247 |
GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity | 3/924 | 15/20758 | 0.02679 | 0.2551 | 0.2339 | 3 | 0.003247 |
GO:0004721 | phosphoprotein phosphatase activity | 15/924 | 194/20758 | 0.02708 | 0.2551 | 0.2339 | 15 | 0.01623 |
GO:0050661 | NADP binding | 6/924 | 52/20758 | 0.0273 | 0.2551 | 0.2339 | 6 | 0.006494 |
GO:0000146 | microfilament motor activity | 5/924 | 39/20758 | 0.02842 | 0.2628 | 0.241 | 5 | 0.005411 |
GO:0030507 | spectrin binding | 4/924 | 27/20758 | 0.03029 | 0.277 | 0.254 | 4 | 0.004329 |
GO:0005041 | low-density lipoprotein particle receptor activity | 3/924 | 16/20758 | 0.03191 | 0.2824 | 0.2589 | 3 | 0.003247 |
GO:0015386 | potassium:proton antiporter activity | 3/924 | 16/20758 | 0.03191 | 0.2824 | 0.2589 | 3 | 0.003247 |
GO:0044325 | transmembrane transporter binding | 11/924 | 131/20758 | 0.03215 | 0.2824 | 0.2589 | 11 | 0.0119 |
GO:0098632 | cell-cell adhesion mediator activity | 6/924 | 54/20758 | 0.03217 | 0.2824 | 0.2589 | 6 | 0.006494 |
GO:0015035 | protein-disulfide reductase activity | 5/924 | 41/20758 | 0.03443 | 0.2933 | 0.269 | 5 | 0.005411 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is natural killer cell inhibitory signaling pathway (7.063956e-41), and the highest (among the lowest 10) is cellular aldehyde metabolic process (2.620359e-05). The ratio is 3.709478e+35, i.e., they differ in 19 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0002769 | natural killer cell inhibitory signaling pathway | 34/914 | 36/21069 | 1.49e-44 | 7.064e-41 | 6.622e-41 | 34 | 0.0372 |
GO:0002767 | immune response-inhibiting cell surface receptor signaling pathway | 34/914 | 61/21069 | 1.324e-30 | 3.137e-27 | 2.941e-27 | 34 | 0.0372 |
GO:0002765 | immune response-inhibiting signal transduction | 34/914 | 63/21069 | 5.86e-30 | 9.259e-27 | 8.679e-27 | 34 | 0.0372 |
GO:0002768 | immune response-regulating cell surface receptor signaling pathway | 67/914 | 470/21069 | 6.918e-18 | 8.197e-15 | 7.684e-15 | 67 | 0.0733 |
GO:0009644 | response to high light intensity | 10/914 | 12/21069 | 1.372e-12 | 1.301e-09 | 1.22e-09 | 10 | 0.01094 |
GO:0042574 | retinal metabolic process | 14/914 | 30/21069 | 5.764e-12 | 4.553e-09 | 4.268e-09 | 14 | 0.01532 |
GO:0010842 | retina layer formation | 15/914 | 37/21069 | 1.239e-11 | 8.392e-09 | 7.867e-09 | 15 | 0.01641 |
GO:0050689 | negative regulation of defense response to virus by host | 8/914 | 10/21069 | 5.07e-10 | 3.004e-07 | 2.816e-07 | 8 | 0.008753 |
GO:0009642 | response to light intensity | 11/914 | 26/21069 | 4.097e-09 | 2.158e-06 | 2.022e-06 | 11 | 0.01204 |
GO:0006081 | cellular aldehyde metabolic process | 17/914 | 81/21069 | 5.528e-08 | 2.62e-05 | 2.456e-05 | 17 | 0.0186 |
GO:0046530 | photoreceptor cell differentiation | 16/914 | 74/21069 | 8.731e-08 | 3.762e-05 | 3.527e-05 | 16 | 0.01751 |
GO:0001523 | retinoid metabolic process | 19/914 | 105/21069 | 1.148e-07 | 4.535e-05 | 4.251e-05 | 19 | 0.02079 |
GO:0016101 | diterpenoid metabolic process | 19/914 | 108/21069 | 1.826e-07 | 6.656e-05 | 6.239e-05 | 19 | 0.02079 |
GO:0042461 | photoreceptor cell development | 14/914 | 60/21069 | 2.039e-07 | 6.903e-05 | 6.471e-05 | 14 | 0.01532 |
GO:0060042 | retina morphogenesis in camera-type eye | 15/914 | 76/21069 | 7.711e-07 | 0.0002437 | 0.0002284 | 15 | 0.01641 |
GO:0001754 | eye photoreceptor cell differentiation | 13/914 | 58/21069 | 9.105e-07 | 0.0002697 | 0.0002528 | 13 | 0.01422 |
GO:0006721 | terpenoid metabolic process | 19/914 | 121/21069 | 1.125e-06 | 0.0003138 | 0.0002942 | 19 | 0.02079 |
GO:0034329 | cell junction assembly | 44/914 | 468/21069 | 1.346e-06 | 0.0003545 | 0.0003323 | 44 | 0.04814 |
GO:0003407 | neural retina development | 16/914 | 91/21069 | 1.695e-06 | 0.0004227 | 0.0003963 | 16 | 0.01751 |
GO:0006063 | uronic acid metabolic process | 9/914 | 29/21069 | 2.391e-06 | 0.0005397 | 0.0005059 | 9 | 0.009847 |
GO:0019585 | glucuronate metabolic process | 9/914 | 29/21069 | 2.391e-06 | 0.0005397 | 0.0005059 | 9 | 0.009847 |
GO:0042462 | eye photoreceptor cell development | 11/914 | 45/21069 | 2.524e-06 | 0.0005439 | 0.0005098 | 11 | 0.01204 |
GO:0052695 | cellular glucuronidation | 8/914 | 24/21069 | 4.811e-06 | 0.0009916 | 0.0009295 | 8 | 0.008753 |
GO:0051056 | regulation of small GTPase mediated signal transduction | 34/914 | 343/21069 | 6.876e-06 | 0.001358 | 0.001273 | 34 | 0.0372 |
GO:0010804 | negative regulation of tumor necrosis factor-mediated signaling pathway | 10/914 | 41/21069 | 7.393e-06 | 0.001402 | 0.001314 | 10 | 0.01094 |
GO:0002842 | positive regulation of T cell mediated immune response to tumor cell | 6/914 | 13/21069 | 8.656e-06 | 0.001578 | 0.001479 | 6 | 0.006565 |
GO:0006720 | isoprenoid metabolic process | 19/914 | 141/21069 | 1.136e-05 | 0.001994 | 0.001869 | 19 | 0.02079 |
GO:0050687 | negative regulation of defense response to virus | 9/914 | 35/21069 | 1.333e-05 | 0.002257 | 0.002116 | 9 | 0.009847 |
GO:0002491 | antigen processing and presentation of endogenous peptide antigen via MHC class II | 6/914 | 14/21069 | 1.459e-05 | 0.002385 | 0.002236 | 6 | 0.006565 |
GO:0019835 | cytolysis | 9/914 | 37/21069 | 2.173e-05 | 0.003433 | 0.003218 | 9 | 0.009847 |
GO:1903902 | positive regulation of viral life cycle | 8/914 | 29/21069 | 2.315e-05 | 0.00347 | 0.003253 | 8 | 0.008753 |
GO:0045657 | positive regulation of monocyte differentiation | 6/914 | 15/21069 | 2.343e-05 | 0.00347 | 0.003253 | 6 | 0.006565 |
GO:0010803 | regulation of tumor necrosis factor-mediated signaling pathway | 13/914 | 78/21069 | 2.853e-05 | 0.004098 | 0.003842 | 13 | 0.01422 |
GO:0042445 | hormone metabolic process | 28/914 | 277/21069 | 3.06e-05 | 0.004266 | 0.003999 | 28 | 0.03063 |
GO:0002840 | regulation of T cell mediated immune response to tumor cell | 6/914 | 16/21069 | 3.611e-05 | 0.00489 | 0.004583 | 6 | 0.006565 |
GO:0002469 | myeloid dendritic cell antigen processing and presentation | 6/914 | 17/21069 | 5.375e-05 | 0.007078 | 0.006634 | 6 | 0.006565 |
GO:0002399 | MHC class II protein complex assembly | 14/914 | 97/21069 | 7.414e-05 | 0.009219 | 0.008641 | 14 | 0.01532 |
GO:0002503 | peptide antigen assembly with MHC class II protein complex | 14/914 | 97/21069 | 7.414e-05 | 0.009219 | 0.008641 | 14 | 0.01532 |
GO:0060041 | retina development in camera-type eye | 20/914 | 175/21069 | 7.585e-05 | 0.009219 | 0.008641 | 20 | 0.02188 |
GO:0001654 | eye development | 36/914 | 422/21069 | 9.373e-05 | 0.0109 | 0.01022 | 36 | 0.03939 |
GO:0048592 | eye morphogenesis | 20/914 | 178/21069 | 9.619e-05 | 0.0109 | 0.01022 | 20 | 0.02188 |
GO:0048880 | sensory system development | 37/914 | 439/21069 | 9.659e-05 | 0.0109 | 0.01022 | 37 | 0.04048 |
GO:0032829 | regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation | 6/914 | 19/21069 | 0.0001094 | 0.01127 | 0.01056 | 6 | 0.006565 |
GO:0032831 | positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation | 6/914 | 19/21069 | 0.0001094 | 0.01127 | 0.01056 | 6 | 0.006565 |
GO:0046598 | positive regulation of viral entry into host cell | 6/914 | 19/21069 | 0.0001094 | 0.01127 | 0.01056 | 6 | 0.006565 |
GO:0075294 | positive regulation by symbiont of entry into host | 6/914 | 19/21069 | 0.0001094 | 0.01127 | 0.01056 | 6 | 0.006565 |
GO:0150063 | visual system development | 36/914 | 426/21069 | 0.0001132 | 0.01142 | 0.01071 | 36 | 0.03939 |
GO:0002495 | antigen processing and presentation of peptide antigen via MHC class II | 15/914 | 116/21069 | 0.0001489 | 0.01453 | 0.01362 | 15 | 0.01641 |
GO:0010882 | regulation of cardiac muscle contraction by calcium ion signaling | 7/914 | 28/21069 | 0.0001502 | 0.01453 | 0.01362 | 7 | 0.007659 |
GO:0010975 | regulation of neuron projection development | 38/914 | 468/21069 | 0.0001685 | 0.01556 | 0.01458 | 38 | 0.04158 |
GO:0099111 | microtubule-based transport | 22/914 | 215/21069 | 0.0001759 | 0.01556 | 0.01458 | 22 | 0.02407 |
GO:0002396 | MHC protein complex assembly | 14/914 | 105/21069 | 0.0001766 | 0.01556 | 0.01458 | 14 | 0.01532 |
GO:0002501 | peptide antigen assembly with MHC protein complex | 14/914 | 105/21069 | 0.0001766 | 0.01556 | 0.01458 | 14 | 0.01532 |
GO:0034754 | cellular hormone metabolic process | 19/914 | 172/21069 | 0.0001782 | 0.01556 | 0.01458 | 19 | 0.02079 |
GO:0002504 | antigen processing and presentation of peptide or polysaccharide antigen via MHC class II | 15/914 | 118/21069 | 0.0001805 | 0.01556 | 0.01458 | 15 | 0.01641 |
GO:0007269 | neurotransmitter secretion | 18/914 | 159/21069 | 0.000192 | 0.01597 | 0.01497 | 18 | 0.01969 |
GO:0099643 | signal release from synapse | 18/914 | 159/21069 | 0.000192 | 0.01597 | 0.01497 | 18 | 0.01969 |
GO:0042572 | retinol metabolic process | 11/914 | 70/21069 | 0.0002001 | 0.01631 | 0.01529 | 11 | 0.01204 |
GO:0043382 | positive regulation of memory T cell differentiation | 6/914 | 21/21069 | 0.000203 | 0.01631 | 0.01529 | 6 | 0.006565 |
GO:0010970 | transport along microtubule | 19/914 | 174/21069 | 0.0002072 | 0.01637 | 0.01534 | 19 | 0.02079 |
GO:0002361 | CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation | 6/914 | 22/21069 | 0.000269 | 0.02024 | 0.01897 | 6 | 0.006565 |
GO:0002836 | positive regulation of response to tumor cell | 6/914 | 22/21069 | 0.000269 | 0.02024 | 0.01897 | 6 | 0.006565 |
GO:0002839 | positive regulation of immune response to tumor cell | 6/914 | 22/21069 | 0.000269 | 0.02024 | 0.01897 | 6 | 0.006565 |
GO:0030705 | cytoskeleton-dependent intracellular transport | 22/914 | 223/21069 | 0.0002955 | 0.02189 | 0.02052 | 22 | 0.02407 |
GO:0009812 | flavonoid metabolic process | 5/914 | 15/21069 | 0.0003171 | 0.02286 | 0.02143 | 5 | 0.00547 |
GO:0019886 | antigen processing and presentation of exogenous peptide antigen via MHC class II | 14/914 | 111/21069 | 0.0003183 | 0.02286 | 0.02143 | 14 | 0.01532 |
GO:0046629 | gamma-delta T cell activation | 8/914 | 41/21069 | 0.0003248 | 0.02298 | 0.02154 | 8 | 0.008753 |
GO:0086012 | membrane depolarization during cardiac muscle cell action potential | 6/914 | 23/21069 | 0.0003507 | 0.02444 | 0.02291 | 6 | 0.006565 |
GO:0001895 | retina homeostasis | 12/914 | 87/21069 | 0.0003664 | 0.02511 | 0.02354 | 12 | 0.01313 |
GO:0007018 | microtubule-based movement | 35/914 | 436/21069 | 0.0003709 | 0.02511 | 0.02354 | 35 | 0.03829 |
GO:0002429 | immune response-activating cell surface receptor signaling pathway | 32/914 | 390/21069 | 0.0004466 | 0.02829 | 0.02652 | 32 | 0.03501 |
GO:0002757 | immune response-activating signal transduction | 32/914 | 390/21069 | 0.0004466 | 0.02829 | 0.02652 | 32 | 0.03501 |
GO:0002424 | T cell mediated immune response to tumor cell | 6/914 | 24/21069 | 0.0004505 | 0.02829 | 0.02652 | 6 | 0.006565 |
GO:0010881 | regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion | 6/914 | 24/21069 | 0.0004505 | 0.02829 | 0.02652 | 6 | 0.006565 |
GO:0043380 | regulation of memory T cell differentiation | 6/914 | 24/21069 | 0.0004505 | 0.02829 | 0.02652 | 6 | 0.006565 |
GO:0006836 | neurotransmitter transport | 22/914 | 230/21069 | 0.0004536 | 0.02829 | 0.02652 | 22 | 0.02407 |
GO:0006892 | post-Golgi vesicle-mediated transport | 14/914 | 116/21069 | 0.000502 | 0.0309 | 0.02897 | 14 | 0.01532 |
GO:0140058 | neuron projection arborization | 7/914 | 34/21069 | 0.000544 | 0.03306 | 0.03099 | 7 | 0.007659 |
GO:0043379 | memory T cell differentiation | 6/914 | 25/21069 | 0.0005712 | 0.03412 | 0.03198 | 6 | 0.006565 |
GO:0032024 | positive regulation of insulin secretion | 11/914 | 79/21069 | 0.0005866 | 0.03412 | 0.03198 | 11 | 0.01204 |
GO:0031503 | protein-containing complex localization | 19/914 | 189/21069 | 0.0005903 | 0.03412 | 0.03198 | 19 | 0.02079 |
GO:0050852 | T cell receptor signaling pathway | 19/914 | 189/21069 | 0.0005903 | 0.03412 | 0.03198 | 19 | 0.02079 |
GO:1900122 | positive regulation of receptor binding | 4/914 | 10/21069 | 0.000599 | 0.03421 | 0.03206 | 4 | 0.004376 |
GO:0044000 | movement in host | 22/914 | 236/21069 | 0.0006434 | 0.03602 | 0.03376 | 22 | 0.02407 |
GO:0042093 | T-helper cell differentiation | 11/914 | 80/21069 | 0.000654 | 0.03602 | 0.03376 | 11 | 0.01204 |
GO:0007214 | gamma-aminobutyric acid signaling pathway | 7/914 | 35/21069 | 0.0006548 | 0.03602 | 0.03376 | 7 | 0.007659 |
GO:0043280 | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | 16/914 | 147/21069 | 0.0006611 | 0.03602 | 0.03376 | 16 | 0.01751 |
GO:0048593 | camera-type eye morphogenesis | 16/914 | 148/21069 | 0.0007121 | 0.03808 | 0.03569 | 16 | 0.01751 |
GO:0090715 | immunological memory formation process | 6/914 | 26/21069 | 0.0007155 | 0.03808 | 0.03569 | 6 | 0.006565 |
GO:0097479 | synaptic vesicle localization | 9/914 | 57/21069 | 0.000723 | 0.03808 | 0.03569 | 9 | 0.009847 |
GO:0051932 | synaptic transmission, GABAergic | 10/914 | 69/21069 | 0.0007485 | 0.03899 | 0.03655 | 10 | 0.01094 |
GO:0043010 | camera-type eye development | 30/914 | 369/21069 | 0.0007703 | 0.03969 | 0.0372 | 30 | 0.03282 |
GO:0016045 | detection of bacterium | 7/914 | 36/21069 | 0.0007828 | 0.0399 | 0.0374 | 7 | 0.007659 |
GO:0002294 | CD4-positive, alpha-beta T cell differentiation involved in immune response | 11/914 | 82/21069 | 0.000808 | 0.0405 | 0.03796 | 11 | 0.01204 |
GO:0006895 | Golgi to endosome transport | 5/914 | 18/21069 | 0.0008117 | 0.0405 | 0.03796 | 5 | 0.00547 |
GO:0048524 | positive regulation of viral process | 10/914 | 70/21069 | 0.0008399 | 0.04103 | 0.03846 | 10 | 0.01094 |
GO:0043372 | positive regulation of CD4-positive, alpha-beta T cell differentiation | 8/914 | 47/21069 | 0.0008496 | 0.04103 | 0.03846 | 8 | 0.008753 |
GO:0044409 | entry into host | 20/914 | 210/21069 | 0.0008521 | 0.04103 | 0.03846 | 20 | 0.02188 |
GO:0002837 | regulation of immune response to tumor cell | 6/914 | 27/21069 | 0.0008865 | 0.04103 | 0.03846 | 6 | 0.006565 |
GO:0045655 | regulation of monocyte differentiation | 6/914 | 27/21069 | 0.0008865 | 0.04103 | 0.03846 | 6 | 0.006565 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
Barplot for enriched categories. Values on top have lower p values.
The category with lowest p value is postsynaptic membrane (0.001911687), and the highest (among the lowest 10) is cell leading edge (0.01112017). The ratio is 5.816942, i.e., they differ in 0 orders of magnitude.
ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | Count | GeneRatioCalc |
|---|---|---|---|---|---|---|---|---|
GO:0045211 | postsynaptic membrane | 31/960 | 296/22283 | 5.042e-06 | 0.001912 | 0.001591 | 31 | 0.03229 |
GO:0097060 | synaptic membrane | 38/960 | 408/22283 | 7.541e-06 | 0.001912 | 0.001591 | 38 | 0.03958 |
GO:0032588 | trans-Golgi network membrane | 21/960 | 166/22283 | 9.837e-06 | 0.001912 | 0.001591 | 21 | 0.02187 |
GO:0005802 | trans-Golgi network | 31/960 | 333/22283 | 5.126e-05 | 0.007472 | 0.006219 | 31 | 0.03229 |
GO:0042613 | MHC class II protein complex | 14/960 | 98/22283 | 7.742e-05 | 0.009028 | 0.007514 | 14 | 0.01458 |
GO:0031902 | late endosome membrane | 21/960 | 194/22283 | 0.0001016 | 0.009869 | 0.008215 | 21 | 0.02187 |
GO:0030658 | transport vesicle membrane | 30/960 | 334/22283 | 0.0001281 | 0.01007 | 0.008384 | 30 | 0.03125 |
GO:0030669 | clathrin-coated endocytic vesicle membrane | 16/960 | 129/22283 | 0.0001382 | 0.01007 | 0.008384 | 16 | 0.01667 |
GO:0001772 | immunological synapse | 10/960 | 58/22283 | 0.0001671 | 0.01082 | 0.00901 | 10 | 0.01042 |
GO:0031252 | cell leading edge | 37/960 | 457/22283 | 0.0001907 | 0.01112 | 0.009256 | 37 | 0.03854 |
GO:0001917 | photoreceptor inner segment | 11/960 | 72/22283 | 0.0002439 | 0.01292 | 0.01076 | 11 | 0.01146 |
GO:0034702 | ion channel complex | 28/960 | 323/22283 | 0.0003783 | 0.01838 | 0.0153 | 28 | 0.02917 |
GO:0031514 | motile cilium | 24/960 | 262/22283 | 0.0004388 | 0.01968 | 0.01638 | 24 | 0.025 |
GO:0034704 | calcium channel complex | 11/960 | 78/22283 | 0.0004965 | 0.02022 | 0.01683 | 11 | 0.01146 |
GO:1990351 | transporter complex | 35/960 | 447/22283 | 0.0005202 | 0.02022 | 0.01683 | 35 | 0.03646 |
GO:0042383 | sarcolemma | 16/960 | 147/22283 | 0.0006157 | 0.02148 | 0.01788 | 16 | 0.01667 |
GO:0030863 | cortical cytoskeleton | 14/960 | 120/22283 | 0.0006631 | 0.02148 | 0.01788 | 14 | 0.01458 |
GO:0045334 | clathrin-coated endocytic vesicle | 16/960 | 148/22283 | 0.0006633 | 0.02148 | 0.01788 | 16 | 0.01667 |
GO:0120103 | centriolar subdistal appendage | 4/960 | 11/22283 | 0.0008859 | 0.02414 | 0.02009 | 4 | 0.004167 |
GO:0005938 | cell cortex | 27/960 | 326/22283 | 0.0009541 | 0.02414 | 0.02009 | 27 | 0.02813 |
GO:1902711 | GABA-A receptor complex | 5/960 | 19/22283 | 0.00103 | 0.02414 | 0.02009 | 5 | 0.005208 |
GO:0005891 | voltage-gated calcium channel complex | 8/960 | 49/22283 | 0.001081 | 0.02414 | 0.02009 | 8 | 0.008333 |
GO:0098791 | Golgi apparatus subcompartment | 36/960 | 484/22283 | 0.001102 | 0.02414 | 0.02009 | 36 | 0.0375 |
GO:0071556 | integral component of lumenal side of endoplasmic reticulum membrane | 14/960 | 127/22283 | 0.001163 | 0.02414 | 0.02009 | 14 | 0.01458 |
GO:0098553 | lumenal side of endoplasmic reticulum membrane | 14/960 | 127/22283 | 0.001163 | 0.02414 | 0.02009 | 14 | 0.01458 |
GO:0098839 | postsynaptic density membrane | 12/960 | 100/22283 | 0.001227 | 0.02414 | 0.02009 | 12 | 0.0125 |
GO:0099023 | vesicle tethering complex | 10/960 | 74/22283 | 0.001238 | 0.02414 | 0.02009 | 10 | 0.01042 |
GO:0005770 | late endosome | 27/960 | 332/22283 | 0.001249 | 0.02414 | 0.02009 | 27 | 0.02813 |
GO:0098984 | neuron to neuron synapse | 30/960 | 383/22283 | 0.001254 | 0.02414 | 0.02009 | 30 | 0.03125 |
GO:0099634 | postsynaptic specialization membrane | 14/960 | 128/22283 | 0.001256 | 0.02414 | 0.02009 | 14 | 0.01458 |
GO:1990454 | L-type voltage-gated calcium channel complex | 4/960 | 12/22283 | 0.001284 | 0.02414 | 0.02009 | 4 | 0.004167 |
GO:0016010 | dystrophin-associated glycoprotein complex | 5/960 | 20/22283 | 0.001326 | 0.02415 | 0.0201 | 5 | 0.005208 |
GO:1902495 | transmembrane transporter complex | 32/960 | 421/22283 | 0.001436 | 0.02537 | 0.02112 | 32 | 0.03333 |
GO:0032279 | asymmetric synapse | 28/960 | 357/22283 | 0.001757 | 0.03012 | 0.02507 | 28 | 0.02917 |
GO:0098576 | lumenal side of membrane | 14/960 | 134/22283 | 0.001947 | 0.03243 | 0.027 | 14 | 0.01458 |
GO:0031256 | leading edge membrane | 18/960 | 196/22283 | 0.002108 | 0.03414 | 0.02842 | 18 | 0.01875 |
GO:0030136 | clathrin-coated vesicle | 23/960 | 279/22283 | 0.002326 | 0.03666 | 0.03051 | 23 | 0.02396 |
GO:0099699 | integral component of synaptic membrane | 16/960 | 168/22283 | 0.002523 | 0.0387 | 0.03221 | 16 | 0.01667 |
GO:0012507 | ER to Golgi transport vesicle membrane | 15/960 | 155/22283 | 0.002906 | 0.04164 | 0.03466 | 15 | 0.01562 |
GO:0032420 | stereocilium | 8/960 | 57/22283 | 0.002927 | 0.04164 | 0.03466 | 8 | 0.008333 |
GO:0097731 | 9+0 non-motile cilium | 14/960 | 140/22283 | 0.002928 | 0.04164 | 0.03466 | 14 | 0.01458 |
GO:0034703 | cation channel complex | 20/960 | 236/22283 | 0.003174 | 0.04304 | 0.03582 | 20 | 0.02083 |
GO:0030134 | COPII-coated ER to Golgi transport vesicle | 17/960 | 188/22283 | 0.003243 | 0.04304 | 0.03582 | 17 | 0.01771 |
GO:0098858 | actin-based cell projection | 21/960 | 253/22283 | 0.003248 | 0.04304 | 0.03582 | 21 | 0.02187 |
GO:0042611 | MHC protein complex | 14/960 | 142/22283 | 0.003334 | 0.04319 | 0.03595 | 14 | 0.01458 |
GO:0090665 | glycoprotein complex | 5/960 | 25/22283 | 0.0038 | 0.04816 | 0.04009 | 5 | 0.005208 |
GO:0016529 | sarcoplasmic reticulum | 9/960 | 74/22283 | 0.004421 | 0.05426 | 0.04517 | 9 | 0.009375 |
GO:0097730 | non-motile cilium | 16/960 | 178/22283 | 0.004468 | 0.05426 | 0.04517 | 16 | 0.01667 |
GO:0099240 | intrinsic component of synaptic membrane | 16/960 | 179/22283 | 0.004716 | 0.05611 | 0.0467 | 16 | 0.01667 |
GO:0030665 | clathrin-coated vesicle membrane | 17/960 | 196/22283 | 0.004946 | 0.05767 | 0.04801 | 17 | 0.01771 |
GO:0016528 | sarcoplasm | 10/960 | 90/22283 | 0.005326 | 0.05916 | 0.04924 | 10 | 0.01042 |
GO:0014069 | postsynaptic density | 26/960 | 351/22283 | 0.005347 | 0.05916 | 0.04924 | 26 | 0.02708 |
GO:1902710 | GABA receptor complex | 5/960 | 27/22283 | 0.005378 | 0.05916 | 0.04924 | 5 | 0.005208 |
GO:0031253 | cell projection membrane | 28/960 | 388/22283 | 0.005619 | 0.06019 | 0.0501 | 28 | 0.02917 |
GO:0019898 | extrinsic component of membrane | 25/960 | 335/22283 | 0.005678 | 0.06019 | 0.0501 | 25 | 0.02604 |
GO:0098978 | glutamatergic synapse | 26/960 | 354/22283 | 0.005959 | 0.06203 | 0.05163 | 26 | 0.02708 |
GO:0030864 | cortical actin cytoskeleton | 10/960 | 92/22283 | 0.006218 | 0.0636 | 0.05294 | 10 | 0.01042 |
GO:0099572 | postsynaptic specialization | 27/960 | 374/22283 | 0.006429 | 0.06462 | 0.05379 | 27 | 0.02813 |
GO:0032421 | stereocilium bundle | 8/960 | 66/22283 | 0.007253 | 0.07061 | 0.05877 | 8 | 0.008333 |
GO:0099061 | integral component of postsynaptic density membrane | 7/960 | 53/22283 | 0.007378 | 0.07061 | 0.05877 | 7 | 0.007292 |
GO:0099060 | integral component of postsynaptic specialization membrane | 9/960 | 80/22283 | 0.007388 | 0.07061 | 0.05877 | 9 | 0.009375 |
GO:0000159 | protein phosphatase type 2A complex | 4/960 | 19/22283 | 0.007904 | 0.07432 | 0.06186 | 4 | 0.004167 |
GO:0030315 | T-tubule | 7/960 | 54/22283 | 0.00817 | 0.0756 | 0.06293 | 7 | 0.007292 |
GO:1905360 | GTPase complex | 6/960 | 42/22283 | 0.00877 | 0.07828 | 0.06515 | 6 | 0.00625 |
GO:0099568 | cytoplasmic region | 22/960 | 294/22283 | 0.008811 | 0.07828 | 0.06515 | 22 | 0.02292 |
GO:0030426 | growth cone | 15/960 | 175/22283 | 0.008861 | 0.07828 | 0.06515 | 15 | 0.01562 |
GO:0097733 | photoreceptor cell cilium | 12/960 | 128/22283 | 0.009322 | 0.07898 | 0.06574 | 12 | 0.0125 |
GO:0005905 | clathrin-coated pit | 9/960 | 83/22283 | 0.009348 | 0.07898 | 0.06574 | 9 | 0.009375 |
GO:0098948 | intrinsic component of postsynaptic specialization membrane | 9/960 | 83/22283 | 0.009348 | 0.07898 | 0.06574 | 9 | 0.009375 |
GO:0099146 | intrinsic component of postsynaptic density membrane | 7/960 | 56/22283 | 0.009938 | 0.08213 | 0.06836 | 7 | 0.007292 |
GO:0000118 | histone deacetylase complex | 9/960 | 84/22283 | 0.01008 | 0.08213 | 0.06836 | 9 | 0.009375 |
GO:0005614 | interstitial matrix | 3/960 | 11/22283 | 0.01014 | 0.08213 | 0.06836 | 3 | 0.003125 |
GO:0005604 | basement membrane | 10/960 | 99/22283 | 0.01028 | 0.08213 | 0.06836 | 10 | 0.01042 |
GO:0035869 | ciliary transition zone | 8/960 | 71/22283 | 0.01114 | 0.08631 | 0.07184 | 8 | 0.008333 |
GO:0016342 | catenin complex | 5/960 | 32/22283 | 0.01124 | 0.08631 | 0.07184 | 5 | 0.005208 |
GO:0019897 | extrinsic component of plasma membrane | 15/960 | 180/22283 | 0.01131 | 0.08631 | 0.07184 | 15 | 0.01562 |
GO:0032426 | stereocilium tip | 4/960 | 21/22283 | 0.0114 | 0.08631 | 0.07184 | 4 | 0.004167 |
GO:0030427 | site of polarized growth | 15/960 | 181/22283 | 0.01186 | 0.08863 | 0.07377 | 15 | 0.01562 |
GO:0098982 | GABA-ergic synapse | 9/960 | 88/22283 | 0.01345 | 0.09929 | 0.08264 | 9 | 0.009375 |
GO:0030135 | coated vesicle | 28/960 | 416/22283 | 0.01366 | 0.09952 | 0.08283 | 28 | 0.02917 |
GO:0150034 | distal axon | 21/960 | 290/22283 | 0.01453 | 0.1046 | 0.08703 | 21 | 0.02187 |
GO:0032838 | plasma membrane bounded cell projection cytoplasm | 19/960 | 255/22283 | 0.01481 | 0.1053 | 0.08767 | 19 | 0.01979 |
GO:0005834 | heterotrimeric G-protein complex | 5/960 | 35/22283 | 0.0163 | 0.1144 | 0.09526 | 5 | 0.005208 |
GO:0044545 | NSL complex | 3/960 | 13/22283 | 0.01649 | 0.1144 | 0.09526 | 3 | 0.003125 |
GO:0030018 | Z disc | 12/960 | 139/22283 | 0.01712 | 0.1174 | 0.09776 | 12 | 0.0125 |
GO:0034705 | potassium channel complex | 9/960 | 94/22283 | 0.01999 | 0.1355 | 0.1128 | 9 | 0.009375 |
GO:1990531 | phospholipid-translocating ATPase complex | 3/960 | 14/22283 | 0.02033 | 0.1362 | 0.1134 | 3 | 0.003125 |
GO:0001726 | ruffle | 15/960 | 194/22283 | 0.02103 | 0.1393 | 0.116 | 15 | 0.01562 |
GO:0005930 | axoneme | 13/960 | 161/22283 | 0.02219 | 0.1454 | 0.121 | 13 | 0.01354 |
GO:0097014 | ciliary plasm | 13/960 | 162/22283 | 0.02322 | 0.1504 | 0.1252 | 13 | 0.01354 |
GO:0098636 | protein complex involved in cell adhesion | 6/960 | 52/22283 | 0.02373 | 0.1521 | 0.1266 | 6 | 0.00625 |
GO:0044753 | amphisome | 3/960 | 15/22283 | 0.02461 | 0.1531 | 0.1274 | 3 | 0.003125 |
GO:0030672 | synaptic vesicle membrane | 11/960 | 130/22283 | 0.02494 | 0.1531 | 0.1274 | 11 | 0.01146 |
GO:0099055 | integral component of postsynaptic membrane | 11/960 | 130/22283 | 0.02494 | 0.1531 | 0.1274 | 11 | 0.01146 |
GO:0099501 | exocytic vesicle membrane | 11/960 | 130/22283 | 0.02494 | 0.1531 | 0.1274 | 11 | 0.01146 |
GO:0016323 | basolateral plasma membrane | 18/960 | 254/22283 | 0.02711 | 0.1646 | 0.137 | 18 | 0.01875 |
GO:0032589 | neuron projection membrane | 7/960 | 69/22283 | 0.02871 | 0.1726 | 0.1436 | 7 | 0.007292 |
GO:0000145 | exocyst | 3/960 | 16/22283 | 0.02934 | 0.1728 | 0.1438 | 3 | 0.003125 |
GO:0036128 | CatSper complex | 3/960 | 16/22283 | 0.02934 | 0.1728 | 0.1438 | 3 | 0.003125 |
GO:0032391 | photoreceptor connecting cilium | 5/960 | 41/22283 | 0.03051 | 0.1755 | 0.146 | 5 | 0.005208 |
These plots show connections among categories:
Enrichment map. Categories are connected by genes in common. Dot size indicates number of genes, dot color indicates adjusted p value.
Gene-concept network. Categories (brown dots) are linked by genes in common (gray dots). The size of category dots indicates gene count.
No significant results were found in DO.
No significant results were found in NCG.